Wen Liu, Hiroshi Kamitakahara, S. Maegawa, H. Toyohara
{"title":"Aquatic invertebrate’s Carbohydrate-binding module assists environmental cellulase to immobilize in wetland sediments","authors":"Wen Liu, Hiroshi Kamitakahara, S. Maegawa, H. Toyohara","doi":"10.3800/pbr.16.191","DOIUrl":null,"url":null,"abstract":": Carbohydrate-binding modules (CBMs) are non-catalytic protein domains that bind to carbohydrates, and have been well studied in microorganisms. Endogenous CBMs in aquatic invertebrates, however, have not yet been identified, and little is known about their ecological significance to wetland environments. Using an approach of characterizing a recombinant CBM ( Cj Cel9A) from a brackish bivalve, Corbicula japonica , this work identified Cj Cel9A-CBM ʼ s cellulose-binding activity. Scatchard plot analysis in the study of Cj Cel9A-CBM binding to α -cellulose showed a high corresponding partitioning coefficient (K r ) of 20.33, indicating Cj Cel9A-CBM ʼ s high affinity for cellulose. In addition, this affinity tolerated a high ion concentration buffer system, consistent with C. japonica ʼ s adaption to brackish wetland environments. Moreover, immuno-scanning electron microscopy (immuno-SEM) suggested that Cj Cel9A-CBM binds to α -cellulose unevenly, which was further determined to be caused by its higher affinity for crystalline cellulose (Cellulose I, mostly seen in plant leaves). Together, these findings suggest that Cj Cel9A-CBM is capable of immobilizing its associated catalytic domain on environmental crystalline cellulose (i.e., fallen leaves) in wetland sediments. Most importantly, they could provide a reasonable answer to a question recognized broadly in wetland ecologists, namely, why many wetland sediments have constant cellulase activities, although the sediments are being washed almost every day.","PeriodicalId":56054,"journal":{"name":"Plankton & Benthos Research","volume":" ","pages":""},"PeriodicalIF":0.6000,"publicationDate":"2021-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plankton & Benthos Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3800/pbr.16.191","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MARINE & FRESHWATER BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
: Carbohydrate-binding modules (CBMs) are non-catalytic protein domains that bind to carbohydrates, and have been well studied in microorganisms. Endogenous CBMs in aquatic invertebrates, however, have not yet been identified, and little is known about their ecological significance to wetland environments. Using an approach of characterizing a recombinant CBM ( Cj Cel9A) from a brackish bivalve, Corbicula japonica , this work identified Cj Cel9A-CBM ʼ s cellulose-binding activity. Scatchard plot analysis in the study of Cj Cel9A-CBM binding to α -cellulose showed a high corresponding partitioning coefficient (K r ) of 20.33, indicating Cj Cel9A-CBM ʼ s high affinity for cellulose. In addition, this affinity tolerated a high ion concentration buffer system, consistent with C. japonica ʼ s adaption to brackish wetland environments. Moreover, immuno-scanning electron microscopy (immuno-SEM) suggested that Cj Cel9A-CBM binds to α -cellulose unevenly, which was further determined to be caused by its higher affinity for crystalline cellulose (Cellulose I, mostly seen in plant leaves). Together, these findings suggest that Cj Cel9A-CBM is capable of immobilizing its associated catalytic domain on environmental crystalline cellulose (i.e., fallen leaves) in wetland sediments. Most importantly, they could provide a reasonable answer to a question recognized broadly in wetland ecologists, namely, why many wetland sediments have constant cellulase activities, although the sediments are being washed almost every day.
期刊介绍:
Plankton and Benthos Research is a peer-reviewed journal publishing quarterly original papers, reviews and notes dealing with any aspect of the biology and ecology of planktonic and benthic organisms and their interactions with the environment in any aquatic system, and is open to all scientists around the world. Submission of a paper is held to imply that it represents an original contribution not previously published and that it is not being considered elsewhere.