Novel insight into the composition of human single-stranded DNA-binding protein 1 (hSSB1)-containing protein complexes

IF 2.946 Q3 Biochemistry, Genetics and Molecular Biology BMC Molecular Biology Pub Date : 2016-12-09 DOI:10.1186/s12867-016-0077-5
Nicholas W. Ashton, Dorothy Loo, Nicolas Paquet, Kenneth J. O’Byrne, Derek J. Richard
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引用次数: 9

Abstract

Single-stranded DNA-binding proteins are essential cellular components required for the protection, metabolism and processing of single-stranded DNA. Human single-stranded DNA-binding protein 1 (hSSB1) is one such protein, with described roles in genome stability maintenance and transcriptional regulation. As yet, however, the mechanisms through which hSSB1 functions and the binding partners with which it interacts remain poorly understood.

In this work, hSSB1 was immunoprecipitated from cell lysate samples that had been enriched for non-soluble nuclear proteins and those associating with hSSB1 identified by mass spectrometry. In doing so, 334 potential hSSB1-associating proteins were identified, with known roles in a range of distinct biological processes. Unexpectedly, whilst hSSB1 has largely been studied in a genome stability context, few other DNA repair or replication proteins were detected. By contrast, a large number of proteins were identified with roles in mRNA metabolism, reflecting a currently emerging area of hSSB1 study. In addition, numerous proteins were detected that comprise various chromatin-remodelling complexes.

These findings provide new insight into the binding partners of hSSB1 and will likely function as a platform for future research.

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对人类单链dna结合蛋白1 (hSSB1)蛋白复合物组成的新见解
单链DNA结合蛋白是单链DNA保护、代谢和加工所必需的细胞成分。人类单链dna结合蛋白1 (hSSB1)就是这样一种蛋白,在基因组稳定性维持和转录调控中发挥作用。然而,到目前为止,人们对hSSB1发挥作用的机制及其相互作用的结合伙伴仍然知之甚少。在这项工作中,从细胞裂解液样品中免疫沉淀hSSB1,这些细胞裂解液已富集了非可溶性核蛋白和通过质谱鉴定的与hSSB1相关的蛋白。在此过程中,334个潜在的hssb1相关蛋白被鉴定出来,在一系列不同的生物过程中具有已知的作用。出乎意料的是,虽然hSSB1已在基因组稳定性背景下进行了大量研究,但很少检测到其他DNA修复或复制蛋白。相比之下,大量蛋白在mRNA代谢中发挥作用,反映了目前hSSB1研究的一个新兴领域。此外,还检测到许多包含各种染色质重塑复合物的蛋白质。这些发现为hSSB1的结合伙伴提供了新的见解,并可能为未来的研究提供平台。
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来源期刊
BMC Molecular Biology
BMC Molecular Biology 生物-生化与分子生物学
CiteScore
4.80
自引率
0.00%
发文量
0
审稿时长
>12 weeks
期刊介绍: BMC Molecular Biology is an open access journal publishing original peer-reviewed research articles in all aspects of DNA and RNA in a cellular context, encompassing investigations of chromatin, replication, recombination, mutation, repair, transcription, translation and RNA processing and function.
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