Identification, characterization, and molecular phylogeny of scorpion enolase (Androctonus crassicauda and Hemiscorpius lepturus)

IF 3.3 4区 医学 Q2 TOXICOLOGY Toxin Reviews Pub Date : 2023-01-02 DOI:10.1080/15569543.2022.2080223
Elham Pondehnezhadan, Atefeh Chamani, F. Salabi, R. Soleimani
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Abstract

Abstract Scorpions are the oldest terrestrial fauna with an ancient evolutionary history. To study the origins of scorpions, we conducted a molecular phylogenetic study of the arthropod using slowly evolving enolase sequences. In this study, we used deep RNA-seq technology to identify the enolase sequences of Androctonus crassicauda and Hemiscorpius lepturus scorpions. The scorpion’s enolase sequences were in silico analyzed to predict the protein structures, physicochemical characterization, and exon-intron organization. The enolase of the scorpion was found to be a protein of 433 amino acids with a molecular mass of ∼47 kDa and an acidic isoelectric point. Here, we reported the existence of 8 exons and an inner GC/AG intron for scorpion enolase. Using homology modeling, the enolase of the scorpions was found to be very conservative during the evolution process. Furthermore, our phylogenetic analysis indicated the independent evolution of the Buthidae family from other scorpions and also the sister group relationship of Hemiscorpionidae with the Caraboctonidae families. The scorpions’ enolase sequences demonstrated a close fit to those of spiders, followed by mite counterparts. This strongly supports our phylogeny analysis, which indicates a sister-group relationship between scorpions and spiders and their common ancestors with mites. This study provided support for the pairing of scorpions with spiders, mites, etc. using enolase as a nuclear gene. Our molecular clock analyzes of the arthropod show that the most recent common ancestor of arachnids and insects were diversified in the Cryogenian period of Neoproterozoic era, earlier than dates reported from fossil records.
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天蝎烯醇化酶的鉴定、表征及分子系统发育
蝎子是最古老的陆生动物,具有悠久的进化历史。为了研究蝎子的起源,我们利用缓慢进化的烯醇化酶序列对这种节肢动物进行了分子系统发育研究。本研究采用深度RNA-seq技术对横纹肌雄蛾和半角蝎的烯醇化酶序列进行了鉴定。对蝎子烯醇化酶序列进行了计算机分析,以预测其蛋白质结构、物理化学特性和外显子-内含子组织。发现蝎子的烯醇化酶是一种由433个氨基酸组成的蛋白质,分子质量为~ 47 kDa,具有酸性等电点。在这里,我们报道了蝎烯醇化酶存在8个外显子和一个内部GC/AG内含子。利用同源性模型,发现蝎子的烯醇化酶在进化过程中是非常保守的。系统发育分析表明,半蝎科与甲蝎科具有独立的进化关系,半蝎科与甲蝎科具有亲缘关系。蝎子的烯醇化酶序列与蜘蛛非常接近,其次是螨虫。这有力地支持了我们的系统发育分析,即蝎子和蜘蛛之间存在姐妹群关系,它们的共同祖先是螨虫。本研究为以烯醇化酶为核基因的蝎子与蜘蛛、螨虫等的配对提供了支持。我们对节肢动物的分子钟分析表明,最近的蛛形纲动物和昆虫的共同祖先在新元古代的低温期多样化,比化石记录的日期早。
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来源期刊
Toxin Reviews
Toxin Reviews 医学-毒理学
CiteScore
6.80
自引率
0.00%
发文量
36
审稿时长
>12 weeks
期刊介绍: Toxin Reviews provides an international forum for publishing state-of-the-art reviews and guest-edited single topic special issues covering the multidisciplinary research in the area of toxins derived from animals, plants and microorganisms. Our aim is to publish reviews that are of broad interest and importance to the toxinology as well as other life science communities. Toxin Reviews aims to encourage scientists to highlight the contribution of toxins as research tools in deciphering molecular and cellular mechanisms, and as prototypes of therapeutic agents. Reviews should emphasize the role of toxins in enhancing our fundamental understanding of life sciences, protein chemistry, structural biology, pharmacology, clinical toxinology and evolution. Prominence will be given to reviews that propose new ideas or approaches and further the knowledge of toxinology.
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