Analysis of Partial Mitochondrial COI and 16S rRNA Gene Sequences Variation of Pagurus brachiomastus and Pagurus proximus (Decapoda: Paguridae) Populations from the South of Russian Far East

Q4 Agricultural and Biological Sciences Genetics of Aquatic Organisms Pub Date : 2023-02-28 DOI:10.4194/ga574
D. Atopkin
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Abstract

Mitochondrial COI and 16S rRNA gene partial sequences were generated for Pagurus brachiomastus from two locations and P. proximus from single location of the south of Russian Far East. Genetic variation and differentiation of P. brachiomastus Russian and South Korean (GenBank data) populations were estimated and compared on the basis of sequence data on two mitochondrial genes separately. Additionally, P. simulans from South Korea was analyzed. Results show P. brachiomastus from two locations of the south of Russian Far East and South Korea and Korean P. simulans differs at intraspecific level based on molecular markers. Median-Joining analysis indicate presence of two main groups of haplotypes, representing P. proximus and P. brachiomastus + P. simulans, respectively. These data support that P. brachiomastus and P. simulans are conspecific. Mismatch distribution analysis showed population growth for P. brachiomastus at the south of Russian Far East. Sequence pairwise variations of both molecular markers appear differently in two far eastern samples of P. brachiomastus, that can be partially explained by active gene flow through hermit crab migrations between two localities after their isolation.
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俄罗斯远东南部地区腕足田鼠和近端田鼠(十足目:田鼠科)部分线粒体COI和16S rRNA基因序列变异分析
从俄罗斯远东南部的两个地点和一个地点分别获得了臂瘤帕古龙和近口帕古龙的线粒体COI和16S rRNA基因部分序列。根据两个线粒体基因的序列数据,分别估算和比较了俄罗斯和韩国(GenBank数据)种群的遗传变异和分化。此外,还对来自韩国的拟青霉进行了分析。研究结果表明,来自俄罗斯远东南部和韩国两个地区的拟臂蛙和韩国拟臂蛙在种内水平上存在分子标记差异。中位连接分析表明存在两组主要的单倍型,分别代表近端P.proximus和腕马P.similans。这些数据支持P.brachiomastus和P.similans是同种的。错配分布分析表明,俄罗斯远东地区南部地区的腕足蟾蜍种群数量呈增长趋势。这两种分子标记的序列成对变异在两个远东的腕肌样本中表现不同,这可以部分解释为寄居蟹在分离后在两个地方之间迁移的活跃基因流。
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来源期刊
Genetics of Aquatic Organisms
Genetics of Aquatic Organisms Agricultural and Biological Sciences-Aquatic Science
CiteScore
0.90
自引率
0.00%
发文量
8
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