Wheat Proteomics for Abiotic Stress Tolerance and Root System Architecture: Current Status and Future Prospects

IF 4 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Proteomes Pub Date : 2022-05-22 DOI:10.3390/proteomes10020017
T. Halder, M. Choudhary, Hui Liu, Yinglong Chen, G. Yan, K. Siddique
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引用次数: 9

Abstract

Wheat is an important staple cereal for global food security. However, climate change is hampering wheat production due to abiotic stresses, such as heat, salinity, and drought. Besides shoot architectural traits, improving root system architecture (RSA) traits have the potential to improve yields under normal and stressed environments. RSA growth and development and other stress responses involve the expression of proteins encoded by the trait controlling gene/genes. Hence, mining the key proteins associated with abiotic stress responses and RSA is important for improving sustainable yields in wheat. Proteomic studies in wheat started in the early 21st century using the two-dimensional (2-DE) gel technique and have extensively improved over time with advancements in mass spectrometry. The availability of the wheat reference genome has allowed the exploration of proteomics to identify differentially expressed or abundant proteins (DEPs or DAPs) for abiotic stress tolerance and RSA improvement. Proteomics contributed significantly to identifying key proteins imparting abiotic stress tolerance, primarily related to photosynthesis, protein synthesis, carbon metabolism, redox homeostasis, defense response, energy metabolism and signal transduction. However, the use of proteomics to improve RSA traits in wheat is in its infancy. Proteins related to cell wall biogenesis, carbohydrate metabolism, brassinosteroid biosynthesis, and transportation are involved in the growth and development of several RSA traits. This review covers advances in quantification techniques of proteomics, progress in identifying DEPs and/or DAPs for heat, salinity, and drought stresses, and RSA traits, and the limitations and future directions for harnessing proteomics in wheat improvement.
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小麦抗非生物胁迫蛋白质组学与根系结构研究现状与展望
小麦是事关全球粮食安全的重要主粮。然而,由于高温、盐度和干旱等非生物胁迫,气候变化正在阻碍小麦生产。除茎部结构性状外,改善根系结构(RSA)性状在正常和逆境环境下均有提高产量的潜力。RSA生长发育和其他胁迫反应涉及性状控制基因/基因编码的蛋白质表达。因此,挖掘与非生物胁迫反应和RSA相关的关键蛋白对提高小麦的可持续产量具有重要意义。小麦蛋白质组学研究始于21世纪初,使用二维(2-DE)凝胶技术,随着质谱技术的进步,研究得到了广泛的改进。小麦参考基因组的可用性使蛋白质组学的探索成为可能,以鉴定差异表达或丰富的蛋白质(DEPs或DAPs),以提高非生物胁迫耐受性和RSA。蛋白质组学有助于鉴定与光合作用、蛋白质合成、碳代谢、氧化还原稳态、防御反应、能量代谢和信号转导等相关的非生物胁迫耐受关键蛋白。然而,利用蛋白质组学来改善小麦的RSA性状还处于起步阶段。与细胞壁生物发生、碳水化合物代谢、油菜素类固醇生物合成和运输相关的蛋白质参与了一些RSA性状的生长和发育。本文综述了蛋白质组学定量技术的进展,热、盐、干旱胁迫下dep和/或dap的鉴定进展,以及RSA性状,以及利用蛋白质组学在小麦改良中的局限性和未来发展方向。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Proteomes
Proteomes Biochemistry, Genetics and Molecular Biology-Clinical Biochemistry
CiteScore
6.50
自引率
3.00%
发文量
37
审稿时长
11 weeks
期刊介绍: Proteomes (ISSN 2227-7382) is an open access, peer reviewed journal on all aspects of proteome science. Proteomes covers the multi-disciplinary topics of structural and functional biology, protein chemistry, cell biology, methodology used for protein analysis, including mass spectrometry, protein arrays, bioinformatics, HTS assays, etc. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the length of papers. Scope: -whole proteome analysis of any organism -disease/pharmaceutical studies -comparative proteomics -protein-ligand/protein interactions -structure/functional proteomics -gene expression -methodology -bioinformatics -applications of proteomics
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