Populations of Unlabelled Networks: Graph Space Geometry and Generalized Geodesic Principal Components

IF 2.4 2区 数学 Q2 BIOLOGY Biometrika Pub Date : 2023-04-04 DOI:10.1093/biomet/asad024
Anna Calissano, Aasa Feragen, S. Vantini
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引用次数: 3

Abstract

Statistical analysis for populations of networks is widely applicable but challenging as networks have strongly non-Euclidean behaviour. Graph space is an exhaustive framework for studying populations of unlabelled networks which are weighted or unweighted, uni- or multi-layered, directed or undirected. Viewing graph space as the quotient of a Euclidean space with respect to a finite group action, we show that it is not a manifold, and that its curvature is unbounded from above. Within this geometrical framework we define generalized geodesic principal components, and we introduce the align all and compute algorithms, all of which allow for the computation of statistics on graph space. The statistics and algorithms are compared with existing methods and empirically validated on three real datasets, showcasing the framework potential utility. The whole framework is implemented within the geomstats Python package.
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未标记网络的总体:图空间几何和广义测地线主成分
网络总体的统计分析是广泛适用的,但具有挑战性,因为网络具有强烈的非欧几里德行为。图空间是一个详尽的框架,用于研究加权或未加权、单层或多层、有向或无向的未标记网络的种群。将图空间看作欧几里得空间相对于有限群作用的商,我们证明了它不是流形,并且它的曲率从上看是无界的。在这个几何框架内,我们定义了广义测地线主分量,并引入了align all和compute算法,所有这些算法都允许在图空间上计算统计信息。将统计数据和算法与现有方法进行了比较,并在三个真实数据集上进行了实证验证,展示了框架的潜在效用。整个框架是在geomstats Python包中实现的。
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来源期刊
Biometrika
Biometrika 生物-生物学
CiteScore
5.50
自引率
3.70%
发文量
56
审稿时长
6-12 weeks
期刊介绍: Biometrika is primarily a journal of statistics in which emphasis is placed on papers containing original theoretical contributions of direct or potential value in applications. From time to time, papers in bordering fields are also published.
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