Machine Learning Model for Predicting Number of COVID19 Cases in Countries with Low Number of Tests

Q3 Computer Science Open Bioinformatics Journal Pub Date : 2021-07-14 DOI:10.1101/2021.07.12.21260298
S. Hashim, S. Farooq, E. Syriopoulos, K. D. Cremer, A. Vogt, N. de Jong, V. Aguado, M. Popescu, A. Mohamed, M. Amin
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引用次数: 1

Abstract

The COVID-19 pandemic has presented a series of new challenges to governments and health care systems. Testing is one important method for monitoring and therefore controlling the spread of COVID-19. Yet with a serious discrepancy in the resources available between rich and poor countries not every country is able to employ widespread testing. Here we developed machine learning models for predicting the number of COVID-19 cases in a country based on multilinear regression and neural networks models. The models are trained on data from US states and tested against the reported infections in the European countries. The model is based on four features: Number of tests Population Percentage Urban Population and Gini index. The population and number of tests have the strongest correlation with the number of infections. The model was then tested on data from European countries for which the correlation coefficient between the actual and predicted cases R2 was found to be 0.88 in the multi linear regression and 0.91 for the neural network model. The model predicts that the actual number of infections in countries where the number of tests is less than 10% of their populations is at least 26 times greater than the reported numbers.
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预测低检测次数国家新冠肺炎病例数的机器学习模型
新冠肺炎大流行给政府和医疗保健系统带来了一系列新的挑战。检测是监测和控制新冠肺炎传播的一种重要方法。然而,由于富国和穷国之间的可用资源存在严重差异,并不是每个国家都能够进行广泛的检测。在这里,我们开发了基于多线性回归和神经网络模型的机器学习模型,用于预测一个国家的新冠肺炎病例数。这些模型是根据美国各州的数据进行训练的,并针对欧洲国家报告的感染情况进行测试。该模型基于四个特征:测试次数城市人口百分比和基尼指数。人群和检测次数与感染人数的相关性最强。然后在来自欧洲国家的数据上测试了该模型,在多元线性回归中,实际病例和预测病例之间的相关系数R2为0.88,在神经网络模型中为0.91。该模型预测,在检测数量低于其人口10%的国家,实际感染人数至少是报告数字的26倍。
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来源期刊
Open Bioinformatics Journal
Open Bioinformatics Journal Computer Science-Computer Science (miscellaneous)
CiteScore
2.40
自引率
0.00%
发文量
4
期刊介绍: The Open Bioinformatics Journal is an Open Access online journal, which publishes research articles, reviews/mini-reviews, letters, clinical trial studies and guest edited single topic issues in all areas of bioinformatics and computational biology. The coverage includes biomedicine, focusing on large data acquisition, analysis and curation, computational and statistical methods for the modeling and analysis of biological data, and descriptions of new algorithms and databases. The Open Bioinformatics Journal, a peer reviewed journal, is an important and reliable source of current information on the developments in the field. The emphasis will be on publishing quality articles rapidly and freely available worldwide.
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