Identification of rare traditional grapevine cultivars using SSR markers and their geographical location within the Czech Republic

IF 1.2 4区 农林科学 Q3 AGRONOMY Czech Journal of Genetics and Plant Breeding Pub Date : 2020-03-17 DOI:10.17221/61/2019-cjgpb
K. Baránková, R. Sotolář, M. Baránek
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引用次数: 3

Abstract

The designation of traditional varieties of grapevine is usually based on verbal information or very dated records. Old rare cultivars found in the Czech Republic were identified by Simple Sequence Repeat (SSR) analysis, a generally accepted method for cultivar identification. These cultivars are primarily maintained in a national collection of genetic resources. Finally a total of 102 candidate genotypes was selected where 49 traditional varieties were identified on the base of nine SSR loci compared with the European Vitis Database. Thirty-six items were registered under the correct designation. The remaining genotypes included four clones, and two genotypes could be described as synonyms. Seven genotypes were found to be incorrectly marked. For three of them, the correct name was found in the database under their SSR profile and four items were considered to be unique as no identical profile was found.
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利用SSR标记鉴定捷克共和国境内稀有传统葡萄品种及其地理位置
传统葡萄品种的命名通常是基于口头信息或非常过时的记录。在捷克共和国发现的古老稀有品种通过简单序列重复(SSR)分析进行鉴定,这是一种公认的品种鉴定方法。这些品种主要保存在国家遗传资源库中。最后选择了102个候选基因型,其中49个传统品种在9个SSR位点的基础上与欧洲Vitis数据库进行了比较。三十六件物品以正确名称登记。其余的基因型包括四个克隆,其中两个基因型可以被描述为同义词。发现7种基因型标记错误。其中三个项目的SSR档案在数据库中找到了正确的名称,四个项目被认为是唯一的,因为没有找到相同的档案。
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来源期刊
Czech Journal of Genetics and Plant Breeding
Czech Journal of Genetics and Plant Breeding Agricultural and Biological Sciences-Plant Science
CiteScore
2.20
自引率
0.00%
发文量
25
审稿时长
>12 weeks
期刊介绍: Original scientific papers, critical reviews articles and short communications from the field of theoretical and applied plant genetics, plant biotechnology and plant breeding. Papers are published in English.
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