Transcriptomics analysis reveals Xanthoceras sorbifolia Bunge leaves’ adaptation strategy to low nitrogen

IF 2.1 3区 农林科学 Q2 FORESTRY Trees Pub Date : 2023-06-22 DOI:10.1007/s00468-023-02414-4
Xinlin Li, Jixiang Zou, Chunyi Jin, Chengchao Yang, Hua Jin
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Key message

This study enriched the understanding of the mechanism of nitrogen tolerance and starvation of yellowhorn and provided a reference for the breeding of low-nitrogen tolerance germplasm in the future.

Abstract

Yellowhorn is a rare woody oil crop in China, which can survive in barren, drought, cold, and even saline-alkali environments. However, its growth and development can be seriously affected by low-nitrogen stress. A comprehensive understanding of its transcriptional regulation activities under low-nitrogen stress is expected to indicate the key molecular mechanisms of its tolerance to low nitrogen levels. In this study, yellowhorn was divided into control, low-nitrogen, and nitrogen-free groups for treatment. Samples were treated for 15 days before assessing physiological characteristics and transcriptome analysis. Under low-nitrogen and no-nitrogen condition, a total of 10,733 differentially expressed genes were identified, among which 3870 genes were up-regulated and 6,863 genes were down-regulated. Under low-nitrogen stress, the most up-regulated genes were enriched in the phenylpropane synthesis pathway, flavonoid synthesis pathway, and plant hormone signal transduction pathway. Our determination of total flavonoids and proanthocyanidins also verified the upregulation of these three pathways. Brassinosteroid, salicylic, and jasmonic acid (BR, SA and JA, respectively) pathway-related genes were significantly up-regulated in the signal transduction pathway of plant hormones. This study provided a comprehensive review of the transcriptomics changes of yellowhorn under low nitrogen stress and detailed its insights into the relevant mechanism of BR, SA, and JA signaling pathway in resisting low-nitrogen stress, laying a solid foundation to further identify the corresponding molecular mechanism of yellowhorn and other woody oil plants.

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转录组学分析揭示了文冠果叶片对低氮的适应策略
本研究丰富了黄角耐氮和饥饿机理的认识,为今后选育耐低氮种质提供参考。黄角是中国罕见的木本油料作物,能在贫瘠、干旱、寒冷甚至盐碱环境中生存。但低氮胁迫会严重影响其生长发育。全面了解其在低氮胁迫下的转录调控活性,有望揭示其耐低氮的关键分子机制。本研究将黄角鸡分为对照组、低氮组和无氮组进行处理。在评估生理特征和转录组分析之前,样品处理15天。在低氮和无氮条件下,共鉴定出10733个差异表达基因,其中上调3870个,下调6863个。在低氮胁迫下,上调最多的基因集中在苯丙烷合成途径、类黄酮合成途径和植物激素信号转导途径。我们对总黄酮和原花青素的测定也证实了这三条通路的上调。油菜素内酯、水杨酸和茉莉酸(分别为BR、SA和JA)通路相关基因在植物激素信号转导通路中显著上调。本研究全面综述了黄角菊在低氮胁迫下的转录组学变化,详细揭示了BR、SA、JA信号通路在抗低氮胁迫中的相关机制,为进一步确定黄角菊及其他木本油料植物的相应分子机制奠定了坚实的基础。
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来源期刊
Trees
Trees 农林科学-林学
CiteScore
4.50
自引率
4.30%
发文量
113
审稿时长
3.8 months
期刊介绍: Trees - Structure and Function publishes original articles on the physiology, biochemistry, functional anatomy, structure and ecology of trees and other woody plants. Also presented are articles concerned with pathology and technological problems, when they contribute to the basic understanding of structure and function of trees. In addition to original articles and short communications, the journal publishes reviews on selected topics concerning the structure and function of trees.
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