Mi-Hee Kim, Suhyeon Park, Junho Lee, J. Baek, Jongsun Park, G. Lee
{"title":"The complete chloroplast genome of Glycyrrhiza uralensis Fisch. isolated in Korea (Fabaceae)","authors":"Mi-Hee Kim, Suhyeon Park, Junho Lee, J. Baek, Jongsun Park, G. Lee","doi":"10.11110/kjpt.2021.51.4.353","DOIUrl":null,"url":null,"abstract":"The chloroplast genome of Glycyrrhiza uralensis Fisch was sequenced to investigate intraspecific variations on the chloroplast genome. Its length is 127,689 bp long (34.3% GC ratio) with atypical structure of chloroplast genome, which is congruent to those of Glycyrrhiza genus. It includes 110 genes (76 protein-coding genes, four rRNAs, and 30 tRNAs). Intronic region of ndhA presented the highest nucleotide diversity based on the six G. uralenesis chloroplast genomes. A total of 150 single nucleotide polymorphisms and 10 insertion and deletion (INDEL) regions were identified from the six G. uralensis chloroplast genomes. Phylogenetic trees show that the six chloroplast genomes of G. uralensis formed the two clades, requiring additional studies to understand it.","PeriodicalId":52232,"journal":{"name":"KOREAN JOURNAL OF PLANT TAXONOMY","volume":" ","pages":""},"PeriodicalIF":0.8000,"publicationDate":"2021-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"KOREAN JOURNAL OF PLANT TAXONOMY","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.11110/kjpt.2021.51.4.353","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 3
Abstract
The chloroplast genome of Glycyrrhiza uralensis Fisch was sequenced to investigate intraspecific variations on the chloroplast genome. Its length is 127,689 bp long (34.3% GC ratio) with atypical structure of chloroplast genome, which is congruent to those of Glycyrrhiza genus. It includes 110 genes (76 protein-coding genes, four rRNAs, and 30 tRNAs). Intronic region of ndhA presented the highest nucleotide diversity based on the six G. uralenesis chloroplast genomes. A total of 150 single nucleotide polymorphisms and 10 insertion and deletion (INDEL) regions were identified from the six G. uralensis chloroplast genomes. Phylogenetic trees show that the six chloroplast genomes of G. uralensis formed the two clades, requiring additional studies to understand it.
对甘草叶绿体基因组进行了测序，探讨了其种内变异。全长127,689 bp (GC比34.3%)，叶绿体基因组结构不典型，与甘草属一致。它包括110个基因(76个蛋白质编码基因，4个rrna和30个trna)。ndhA内含子区核苷酸多样性在6个G. uralenesis叶绿体基因组中最高。从6个乌拉尔猕猴桃叶绿体基因组中共鉴定出150个单核苷酸多态性和10个INDEL区。系统发育树显示，乌拉尔杉的6个叶绿体基因组形成了这两个支系，需要进一步的研究来了解它。
京公网安备 11010802042870号
京ICP备2023020795号-1
分享
求助内容：
应助结果提醒方式：
扫码关注我们
