An improved joint non-negative matrix factorization for identifying surgical treatment timing of neonatal necrotizing enterocolitis

IF 3.1 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Bosnian journal of basic medical sciences Pub Date : 2022-05-15 DOI:10.17305/bjbms.2022.7046
Guoqiang Qi, Shou-jiang Huang, Dengming Lai, Jing Li, Yonggen Zhao, C.C.K. Shen, Jian Huang, Tianmei Liu, Kai Wei, Jinfa Dou, Q. Shu, Gang Yu
{"title":"An improved joint non-negative matrix factorization for identifying surgical treatment timing of neonatal necrotizing enterocolitis","authors":"Guoqiang Qi, Shou-jiang Huang, Dengming Lai, Jing Li, Yonggen Zhao, C.C.K. Shen, Jian Huang, Tianmei Liu, Kai Wei, Jinfa Dou, Q. Shu, Gang Yu","doi":"10.17305/bjbms.2022.7046","DOIUrl":null,"url":null,"abstract":"Neonatal necrotizing enterocolitis is a severe neonatal intestinal disease. Timely, the identification of surgical indications is essential for newborns to seek the best time for treatment and improve prognosis. This paper attempts to establish an algorithm model based on multimodal clinical data to determine the features of surgical indications and construct an auxiliary diagnosis model. The proposed algorithm adds hypergraph constraints on the two modal data based on Joint Non-negative Matrix Factorization, aiming to mine the higher-order correlations of the two data features. In addition, the adjacency matrix of the two kinds of data is used as a network regularization constraint to prevent overfitting. Orthogonal and L1-norm regulations were introduced to avoid feature redundancy and perform feature selection, respectively, and confirmed 14 clinical features. Finally, we used three classifiers, random forest, support vector machine, and logistic regression, to perform binary classification of patients requiring surgery. The results show that when the features selected by the proposed algorithm model are classified by random forest, the area under the ROC curve is 0.8, which has high prediction accuracy.","PeriodicalId":9147,"journal":{"name":"Bosnian journal of basic medical sciences","volume":"22 1","pages":"972 - 981"},"PeriodicalIF":3.1000,"publicationDate":"2022-05-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bosnian journal of basic medical sciences","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.17305/bjbms.2022.7046","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MEDICINE, RESEARCH & EXPERIMENTAL","Score":null,"Total":0}
引用次数: 1

Abstract

Neonatal necrotizing enterocolitis is a severe neonatal intestinal disease. Timely, the identification of surgical indications is essential for newborns to seek the best time for treatment and improve prognosis. This paper attempts to establish an algorithm model based on multimodal clinical data to determine the features of surgical indications and construct an auxiliary diagnosis model. The proposed algorithm adds hypergraph constraints on the two modal data based on Joint Non-negative Matrix Factorization, aiming to mine the higher-order correlations of the two data features. In addition, the adjacency matrix of the two kinds of data is used as a network regularization constraint to prevent overfitting. Orthogonal and L1-norm regulations were introduced to avoid feature redundancy and perform feature selection, respectively, and confirmed 14 clinical features. Finally, we used three classifiers, random forest, support vector machine, and logistic regression, to perform binary classification of patients requiring surgery. The results show that when the features selected by the proposed algorithm model are classified by random forest, the area under the ROC curve is 0.8, which has high prediction accuracy.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
一种改进的关节非负矩阵因子分解法用于确定新生儿坏死性小肠结肠炎的手术治疗时机
新生儿坏死性小肠结肠炎是一种严重的新生儿肠道疾病。及时、明确手术指征对于新生儿寻求最佳治疗时机和改善预后至关重要。本文试图建立一个基于多模态临床数据的算法模型,以确定手术适应症的特征,并构建辅助诊断模型。该算法基于联合非负矩阵分解,在两个模态数据上添加超图约束,旨在挖掘两个数据特征的高阶相关性。此外,两种数据的邻接矩阵被用作网络正则化约束,以防止过拟合。分别引入正交和L1范数调节来避免特征冗余和进行特征选择,并确认了14个临床特征。最后,我们使用三个分类器,随机森林、支持向量机和逻辑回归,对需要手术的患者进行二元分类。结果表明,当所提出的算法模型选择的特征被随机森林分类时,ROC曲线下的面积为0.8,具有较高的预测精度。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Bosnian journal of basic medical sciences
Bosnian journal of basic medical sciences 医学-医学:研究与实验
CiteScore
7.40
自引率
5.90%
发文量
98
审稿时长
35 days
期刊介绍: The Bosnian Journal of Basic Medical Sciences (BJBMS) is an international, English-language, peer reviewed journal, publishing original articles from different disciplines of basic medical sciences. BJBMS welcomes original research and comprehensive reviews as well as short research communications in the field of biochemistry, genetics, immunology, microbiology, pathology, pharmacology, pharmaceutical sciences and physiology.
期刊最新文献
Relationship between PD-L1 expression and prognostic factors in high-risk cutaneous squamous and basal cell carcinoma. Predictors of COVID-19 severity among pregnant patients. Associations of non-HDL-C and triglyceride/HDL-C ratio with coronary plaque burden and plaque characteristics in young adults. Evaluation of cerebrospinal fluid neurofilament light chain levels in multiple sclerosis and non-demyelinating diseases of the central nervous system: clinical and biochemical perspective. The impact of vitamin and mineral supplements usage prior to COVID-19 infection on disease severity and hospitalization.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1