Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise

IF 1.1 Q3 INTEGRATIVE & COMPLEMENTARY MEDICINE International Journal of Yoga Pub Date : 2022-01-01 DOI:10.4103/ijoy.ijoy_146_21
Manoj Khokhar, S. Tomo, A. Gadwal, P. Purohit
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引用次数: 1

Abstract

Background: Yoga is a multifaceted spiritual tool that helps in maintaining health, peace of mind, and positive thoughts. In the context of asana, yoga is similar to physical exercise. This study aims to construct a molecular network to find hub genes that play important roles in physical exercise and yoga. Methodology: We combined differentially expressed genes (DEGs) in yoga and exercise using computational bioinformatics from publicly available gene expression omnibus (GEO) datasets and identified the codifferentially expressed mRNAs with GEO2R. The co-DEGs were divided into four different groups and each group was subjected to protein–protein interaction (PPI) network, pathways analysis, and gene ontology. Results: Our study identified immunological modulation as a dominant target of differential expression in yoga and exercise. Yoga predominantly modulated genes affecting the Th1 and NK cells, whereas Cytokines, Macrophage activation, and oxidative stress were affected by exercise. We also observed that while yoga regulated genes for two main physiological functions of the body, namely Circadian Rhythm (BHLHE40) and immunity (LBP, T-box transcription factor 21, CEACAM1), exercise-regulated genes involved in apoptosis (BAG3, protein kinase C alpha), angiogenesis, and cellular adhesion (EPH receptor A1). Conclusion: The dissimilarity in the genetic expression patterns in Yoga and exercise highlights the discrete effect of each in biological systems. The integration and convergences of multi-omics signals can provide deeper and comprehensive insights into the various biological mechanisms through which yoga and exercise exert their beneficial effects and opens up potential newer research areas.
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多组学整合和相互作用揭示了瑜伽和锻炼有益效果的分子网络和调节因子
背景:瑜伽是一种多方面的精神工具,有助于保持健康、心灵平静和积极的想法。在体式的背景下,瑜伽类似于体育锻炼。这项研究旨在构建一个分子网络,寻找在体育锻炼和瑜伽中发挥重要作用的枢纽基因。方法:我们使用来自公开基因表达综合(GEO)数据集的计算生物信息学,将瑜伽和锻炼中的差异表达基因(DEGs)结合起来,并用GEO2R鉴定了共差异表达的mRNA。共DEG被分为四组,每组接受蛋白质-蛋白质相互作用(PPI)网络、通路分析和基因本体论。结果:我们的研究确定免疫调节是瑜伽和运动中差异表达的主要靶点。瑜伽主要调节影响Th1和NK细胞的基因,而细胞因子、巨噬细胞激活和氧化应激受运动影响。我们还观察到,虽然瑜伽调节身体两种主要生理功能的基因,即昼夜节律(BHLHE40)和免疫(LBP,T-box转录因子21,CEACAM1),但运动调节参与细胞凋亡(BAG3,蛋白激酶Cα)、血管生成和细胞粘附(EPH受体A1)的基因。结论:瑜伽和运动中基因表达模式的差异凸显了两者在生物系统中的离散效应。多组学信号的整合和汇聚可以对瑜伽和锻炼发挥有益作用的各种生物学机制提供更深入和全面的见解,并开辟潜在的新研究领域。
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来源期刊
International Journal of Yoga
International Journal of Yoga INTEGRATIVE & COMPLEMENTARY MEDICINE-
自引率
12.50%
发文量
37
审稿时长
24 weeks
期刊最新文献
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