Learning a Discriminative Feature Attention Network for pancreas CT segmentation

Mei-xiang Huang, Yuan-jin Wang, Chong-fei Huang, Jing Yuan, De-xing Kong
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Abstract

Accurate pancreas segmentation is critical for the diagnosis and management of diseases of the pancreas. It is challenging to precisely delineate pancreas due to the highly variations in volume, shape and location. In recent years, coarse-to-fine methods have been widely used to alleviate class imbalance issue and improve pancreas segmentation accuracy. However, cascaded methods could be computationally intensive and the refined results are significantly dependent on the performance of its coarse segmentation results. To balance the segmentation accuracy and computational efficiency, we propose a Discriminative Feature Attention Network for pancreas segmentation, to effectively highlight pancreas features and improve segmentation accuracy without explicit pancreas location. The final segmentation is obtained by applying a simple yet effective post-processing step. Two experiments on both public NIH pancreas CT dataset and abdominal BTCV multi-organ dataset are individually conducted to show the effectiveness of our method for 2D pancreas segmentation. We obtained average Dice Similarity Coefficient (DSC) of 82.82±6.09%, average Jaccard Index (JI) of 71.13± 8.30% and average Symmetric Average Surface Distance (ASD) of 1.69 ± 0.83 mm on the NIH dataset. Compared to the existing deep learning-based pancreas segmentation methods, our experimental results achieve the best average DSC and JI value.

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胰腺CT分割的判别特征注意网络学习
准确的胰腺分割对于胰腺疾病的诊断和管理至关重要。由于胰腺体积、形状和位置的高度变化,精确描绘胰腺是一项挑战。近年来,从粗到细的方法被广泛用于缓解类不平衡问题,提高胰腺分割的准确性。然而,级联方法可能是计算密集型的,并且细化的结果在很大程度上取决于其粗略分割结果的性能。为了平衡分割精度和计算效率,我们提出了一种用于胰腺分割的判别特征注意力网络,以在没有明确胰腺位置的情况下有效地突出胰腺特征并提高分割精度。通过应用简单而有效的后处理步骤来获得最终分割。分别在公共NIH胰腺CT数据集和腹部BTCV多器官数据集上进行了两个实验,以证明我们的方法对2D胰腺分割的有效性。在NIH数据集上,我们获得了82.82±6.09%的平均骰子相似系数(DSC)、71.13±8.30%的平均Jaccard指数(JI)和1.69±0.83mm的平均对称平均表面距离(ASD)。与现有的基于深度学习的胰腺分割方法相比,我们的实验结果获得了最佳的DSC和JI平均值。
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来源期刊
自引率
10.00%
发文量
33
期刊介绍: Applied Mathematics promotes the integration of mathematics with other scientific disciplines, expanding its fields of study and promoting the development of relevant interdisciplinary subjects. The journal mainly publishes original research papers that apply mathematical concepts, theories and methods to other subjects such as physics, chemistry, biology, information science, energy, environmental science, economics, and finance. In addition, it also reports the latest developments and trends in which mathematics interacts with other disciplines. Readers include professors and students, professionals in applied mathematics, and engineers at research institutes and in industry. Applied Mathematics - A Journal of Chinese Universities has been an English-language quarterly since 1993. The English edition, abbreviated as Series B, has different contents than this Chinese edition, Series A.
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