Re-evaluation of the impact of BUD21 deletion on xylose utilization by Saccharomyces cerevisiae

IF 3.7 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Metabolic Engineering Communications Pub Date : 2023-06-01 DOI:10.1016/j.mec.2023.e00218
Venkatachalam Narayanan , Anders G. Sandström , Marie F. Gorwa-Grauslund
{"title":"Re-evaluation of the impact of BUD21 deletion on xylose utilization by Saccharomyces cerevisiae","authors":"Venkatachalam Narayanan ,&nbsp;Anders G. Sandström ,&nbsp;Marie F. Gorwa-Grauslund","doi":"10.1016/j.mec.2023.e00218","DOIUrl":null,"url":null,"abstract":"<div><p>Various rational metabolic engineering and random approaches have been applied to introduce and improve xylose utilization and ethanol productivity by <em>Saccharomyces cerevisiae</em>. Among them, the <em>BUD21</em> gene was identified as an interesting candidate for enhancing xylose consumption as its deletion appeared to be sufficient to improve growth, substrate utilization and ethanol productivity on xylose, even in a laboratory strain lacking a heterologous xylose pathway. The present study aimed at studying the influence of <em>BUD21</em> deletion in recombinant strains carrying heterologous oxido-reductive xylose utilization pathway. The positive effect of <em>BUD21</em> gene deletion on aerobic growth and xylose utilization could not be confirmed in two non-engineered laboratory strains (BY4741 and CEN.PK 113-7D) that were grown in YP rich medium with 20 g/L xylose as sole carbon source, despite the fact that effective deletion of <em>BUD21</em> gene was confirmed using both genotypic (colony PCR) and phenotypic (heat sensitive phenotype of the <em>BUD21</em> deletion mutant) control experiments. Therefore, the effect of <em>BUD21</em> deletion on xylose fermentation might be strain- or medium-dependent.</p></div>","PeriodicalId":18695,"journal":{"name":"Metabolic Engineering Communications","volume":null,"pages":null},"PeriodicalIF":3.7000,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Metabolic Engineering Communications","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2214030123000019","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Various rational metabolic engineering and random approaches have been applied to introduce and improve xylose utilization and ethanol productivity by Saccharomyces cerevisiae. Among them, the BUD21 gene was identified as an interesting candidate for enhancing xylose consumption as its deletion appeared to be sufficient to improve growth, substrate utilization and ethanol productivity on xylose, even in a laboratory strain lacking a heterologous xylose pathway. The present study aimed at studying the influence of BUD21 deletion in recombinant strains carrying heterologous oxido-reductive xylose utilization pathway. The positive effect of BUD21 gene deletion on aerobic growth and xylose utilization could not be confirmed in two non-engineered laboratory strains (BY4741 and CEN.PK 113-7D) that were grown in YP rich medium with 20 g/L xylose as sole carbon source, despite the fact that effective deletion of BUD21 gene was confirmed using both genotypic (colony PCR) and phenotypic (heat sensitive phenotype of the BUD21 deletion mutant) control experiments. Therefore, the effect of BUD21 deletion on xylose fermentation might be strain- or medium-dependent.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
BUD21缺失对酿酒酵母木糖利用影响的再评价
各种合理的代谢工程和随机方法已被应用于引入和提高酿酒酵母对木糖的利用率和乙醇产量。其中,BUD21基因被鉴定为增强木糖消耗的有趣候选者,因为其缺失似乎足以提高木糖的生长、底物利用率和乙醇生产率,即使在缺乏异源木糖途径的实验室菌株中也是如此。本研究旨在研究BUD21缺失对携带异源氧化还原木糖利用途径的重组菌株的影响。BUD21基因缺失对需氧生长和木糖利用的积极作用在两个非工程实验室菌株(BY4741和CEN.PK 113-7D)中不能得到证实,这两个菌株生长在以20g/L木糖作为唯一碳源的富含YP的培养基中,尽管使用基因型(菌落PCR)和表型(BUD21缺失突变体的热敏表型)对照实验证实了BUD21基因的有效缺失。因此,BUD21缺失对木糖发酵的影响可能是菌株或培养基依赖性的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Metabolic Engineering Communications
Metabolic Engineering Communications Medicine-Endocrinology, Diabetes and Metabolism
CiteScore
13.30
自引率
1.90%
发文量
22
审稿时长
18 weeks
期刊介绍: Metabolic Engineering Communications, a companion title to Metabolic Engineering (MBE), is devoted to publishing original research in the areas of metabolic engineering, synthetic biology, computational biology and systems biology for problems related to metabolism and the engineering of metabolism for the production of fuels, chemicals, and pharmaceuticals. The journal will carry articles on the design, construction, and analysis of biological systems ranging from pathway components to biological complexes and genomes (including genomic, analytical and bioinformatics methods) in suitable host cells to allow them to produce novel compounds of industrial and medical interest. Demonstrations of regulatory designs and synthetic circuits that alter the performance of biochemical pathways and cellular processes will also be presented. Metabolic Engineering Communications complements MBE by publishing articles that are either shorter than those published in the full journal, or which describe key elements of larger metabolic engineering efforts.
期刊最新文献
Metabolic engineering of Acinetobacter baylyi ADP1 for naringenin production PEZy-miner: An artificial intelligence driven approach for the discovery of plastic-degrading enzyme candidates Production of (R)-citramalate by engineered Saccharomyces cerevisiae Engineering thioesterase as a driving force for novel itaconate production via its degradation scheme A comparative analysis of NADPH supply strategies in Saccharomyces cerevisiae: Production of d-xylitol from d-xylose as a case study
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1