Re-evaluation of the impact of BUD21 deletion on xylose utilization by Saccharomyces cerevisiae

IF 3.7 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Metabolic Engineering Communications Pub Date : 2023-06-01 DOI:10.1016/j.mec.2023.e00218
Venkatachalam Narayanan , Anders G. Sandström , Marie F. Gorwa-Grauslund
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Abstract

Various rational metabolic engineering and random approaches have been applied to introduce and improve xylose utilization and ethanol productivity by Saccharomyces cerevisiae. Among them, the BUD21 gene was identified as an interesting candidate for enhancing xylose consumption as its deletion appeared to be sufficient to improve growth, substrate utilization and ethanol productivity on xylose, even in a laboratory strain lacking a heterologous xylose pathway. The present study aimed at studying the influence of BUD21 deletion in recombinant strains carrying heterologous oxido-reductive xylose utilization pathway. The positive effect of BUD21 gene deletion on aerobic growth and xylose utilization could not be confirmed in two non-engineered laboratory strains (BY4741 and CEN.PK 113-7D) that were grown in YP rich medium with 20 g/L xylose as sole carbon source, despite the fact that effective deletion of BUD21 gene was confirmed using both genotypic (colony PCR) and phenotypic (heat sensitive phenotype of the BUD21 deletion mutant) control experiments. Therefore, the effect of BUD21 deletion on xylose fermentation might be strain- or medium-dependent.

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BUD21缺失对酿酒酵母木糖利用影响的再评价
各种合理的代谢工程和随机方法已被应用于引入和提高酿酒酵母对木糖的利用率和乙醇产量。其中,BUD21基因被鉴定为增强木糖消耗的有趣候选者,因为其缺失似乎足以提高木糖的生长、底物利用率和乙醇生产率,即使在缺乏异源木糖途径的实验室菌株中也是如此。本研究旨在研究BUD21缺失对携带异源氧化还原木糖利用途径的重组菌株的影响。BUD21基因缺失对需氧生长和木糖利用的积极作用在两个非工程实验室菌株(BY4741和CEN.PK 113-7D)中不能得到证实,这两个菌株生长在以20g/L木糖作为唯一碳源的富含YP的培养基中,尽管使用基因型(菌落PCR)和表型(BUD21缺失突变体的热敏表型)对照实验证实了BUD21基因的有效缺失。因此,BUD21缺失对木糖发酵的影响可能是菌株或培养基依赖性的。
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来源期刊
Metabolic Engineering Communications
Metabolic Engineering Communications Medicine-Endocrinology, Diabetes and Metabolism
CiteScore
13.30
自引率
1.90%
发文量
22
审稿时长
18 weeks
期刊介绍: Metabolic Engineering Communications, a companion title to Metabolic Engineering (MBE), is devoted to publishing original research in the areas of metabolic engineering, synthetic biology, computational biology and systems biology for problems related to metabolism and the engineering of metabolism for the production of fuels, chemicals, and pharmaceuticals. The journal will carry articles on the design, construction, and analysis of biological systems ranging from pathway components to biological complexes and genomes (including genomic, analytical and bioinformatics methods) in suitable host cells to allow them to produce novel compounds of industrial and medical interest. Demonstrations of regulatory designs and synthetic circuits that alter the performance of biochemical pathways and cellular processes will also be presented. Metabolic Engineering Communications complements MBE by publishing articles that are either shorter than those published in the full journal, or which describe key elements of larger metabolic engineering efforts.
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