{"title":"Proteopathogen2, a database and web tool to store and display proteomics identification results in the mzIdentML standard","authors":"Vital Vialas , Concha Gil","doi":"10.1016/j.euprot.2015.04.002","DOIUrl":null,"url":null,"abstract":"<div><p>The Proteopathogen database was the first proteomics online resource focused on experiments related to <em>Candida albicans</em> and other fungal pathogens and their interaction with the host. Since then, the HUPO-PSI standards were implemented and settled, and the first large scale <em>C. albicans</em> proteomics resource appeared as a <em>C. albicans</em> PeptideAltas. This has enabled the remodeling of Proteopathogen to take advantage and benefit from the use of the HUPO-PSI adopted format for peptide and protein identification mzIdentML and continue offering a centralized resource for <em>C. albicans</em>, other fungal pathogens and different cell lines proteomics data.</p></div>","PeriodicalId":38260,"journal":{"name":"EuPA Open Proteomics","volume":"8 ","pages":"Pages 22-27"},"PeriodicalIF":0.0000,"publicationDate":"2015-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.euprot.2015.04.002","citationCount":"4","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"EuPA Open Proteomics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2212968515000112","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 4
Abstract
The Proteopathogen database was the first proteomics online resource focused on experiments related to Candida albicans and other fungal pathogens and their interaction with the host. Since then, the HUPO-PSI standards were implemented and settled, and the first large scale C. albicans proteomics resource appeared as a C. albicans PeptideAltas. This has enabled the remodeling of Proteopathogen to take advantage and benefit from the use of the HUPO-PSI adopted format for peptide and protein identification mzIdentML and continue offering a centralized resource for C. albicans, other fungal pathogens and different cell lines proteomics data.
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