Cloning and Expression Analysis of Lysophosphatidic Acid Acyltransferase (LPAT) Encoding Gene in Peanut

Q3 Agricultural and Biological Sciences Acta Agronomica Sinica Pub Date : 2012-02-01 DOI:10.1016/S1875-2780(11)60104-1
Si-Long CHEN , Jia-Quan HUANG , Yong LEI , Xiao-Ping REN , Qi-Gen WEN , Yu-Ning CHEN , Hui-Fang JIANG , Li-Ying YAN , Bo-Shou LIAO
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引用次数: 5

Abstract

Lysophosphatidic acid acyltransferase (LPAT) is one of the key enzymes in biosynthesis pathway of triacylglycerol (TAG) in plant. A full-length cDNA library of peanut (Arachis hypogaea L.) was constructed from seed by means of a large number of sequences of expressed sequence tag (EST) and gene functional annotation. A lysophosphatidic acid acyltransferase gene, designated AhLPAT, and its genomic DNA sequence was isolated from peanut. The sequence of AhLPAT cDNA was 1753 bp, and its genomic sequence was 5331 bp. Bioinformatic analysis showed that AhLPAT was composed of 11 exons and 10 introns with typical GT-AG sequence at the splice site. A peptide of 387 amino acid residues was deduced from AhLPAT, with molecular weight of 43.2 kD and isoelectric point (pI) of 9.42. Conserved domain prediction indicated that AhLPAT comprised a typical conserved acyltransferase domain and a conserved lysophospholipid acyltransferase domain. The deduced amino acid had a high sequence similarity with the LPAT proteins from other species. Similarities for amino acid sequence of LPAT protein between peanut and Tropaeolum majus, Brassica napus, Crambe hispanica subsp. abyssinica, Ricinus communis, and Arabidopsis thaliana were 90%, 89%, 89%, 88%, and 87%, respectively. The phylogenetic tree suggested that AhLPAT and AtLPAT2 derived from A. thaliana were grouped into the same class, and both of them were endoplasmic reticulum type LPATs. The result of quantitative RT-PCR assay indicated that AhLPAT was ubiquitously expressed in root, stem, leaf, flower, gynophore, and seed of peanut with the highest level in gynophore and seed. The peak expression was in the period of 50–60 d after flowering. Correlation between AhLPAT expression and oil accumulation was significant (r = 0.63, P < 0.05). These results suggest that AhLPAT plays an important role in peanut TAG biosynthesis.

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花生溶血磷脂酸酰基转移酶(LPAT)编码基因的克隆与表达分析
溶血磷脂酸酰基转移酶(LPAT)是植物三酰基甘油(TAG)生物合成途径中的关键酶之一。以花生种子为材料,利用大量表达序列标签(EST)序列和基因功能标注,构建了花生全长cDNA文库。从花生中分离到溶血磷脂酸酰基转移酶基因AhLPAT及其基因组DNA序列。AhLPAT cDNA序列为1753 bp,基因组序列为5331 bp。生物信息学分析表明,AhLPAT由11个外显子和10个内含子组成,在剪接位点具有典型的GT-AG序列。从AhLPAT中得到387个氨基酸残基的肽,分子量为43.2 kD,等电点(pI)为9.42。保守结构域预测表明,AhLPAT包含一个典型的保守酰基转移酶结构域和一个保守的溶血磷脂酰基转移酶结构域。所得氨基酸序列与其他物种的LPAT蛋白具有较高的相似性。花生LPAT蛋白的氨基酸序列与大对调、甘蓝型油菜、海苔亚种的相似性。深渊草、蓖麻、拟南芥分别为90%、89%、89%、88%和87%。系统发育树表明,拟南拟南植物的AhLPAT和AtLPAT2属于同一类,均为内质网型lpat。定量RT-PCR检测结果表明,AhLPAT在花生根、茎、叶、花、雌蕊和种子中普遍表达,其中在雌蕊和种子中表达量最高。花期后50 ~ 60 d为表达高峰。AhLPAT的表达与原油聚集量有显著相关性(r = 0.63, P <0.05)。这些结果表明AhLPAT在花生TAG的生物合成中起重要作用。
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