A novel transcriptional repressor specifically regulates xylanase gene 1 in Trichoderma reesei

IF 6.1 1区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biotechnology for Biofuels Pub Date : 2023-10-27 DOI:10.1186/s13068-023-02417-w
Wenqiang Xu, Yajing Ren, Yuxiao Xia, Lin Liu, Xiangfeng Meng, Guanjun Chen, Weixin Zhang, Weifeng Liu
{"title":"A novel transcriptional repressor specifically regulates xylanase gene 1 in Trichoderma reesei","authors":"Wenqiang Xu,&nbsp;Yajing Ren,&nbsp;Yuxiao Xia,&nbsp;Lin Liu,&nbsp;Xiangfeng Meng,&nbsp;Guanjun Chen,&nbsp;Weixin Zhang,&nbsp;Weifeng Liu","doi":"10.1186/s13068-023-02417-w","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><p>The well-known industrial fungus <i>Trichoderma reesei</i> has an excellent capability of secreting a large amount of cellulases and xylanases. The induced expression of cellulase and xylanase genes is tightly controlled at the transcriptional level. However, compared to the intensive studies on the intricate regulatory mechanism of cellulase genes, efforts to understand how xylanase genes are regulated are relatively limited, which impedes the further improvement of xylanase production by <i>T. reesei</i> via rational strain engineering.</p><h3>Results</h3><p>To identify transcription factors involved in regulating xylanase gene expression in <i>T. reesei</i>, yeast one-hybrid screen was performed based on the promoters of two major extracellular xylanase genes <i>xyn1</i> and <i>xyn2</i>. A putative transcription factor named XTR1 showing significant binding capability to the <i>xyn1</i> promoter but not that of <i>xyn2</i>, was successfully isolated. Deletion of <i>xtr1</i> significantly increased the transcriptional level of <i>xyn1</i>, but only exerted a minor promoting effect on that of <i>xyn2</i>. The xylanase activity was increased by ~ 50% with XTR1 elimination but the cellulase activity was hardly affected. Subcellular localization analysis of XTR1 fused to a green fluorescence protein demonstrated that XTR1 is a nuclear protein. Further analyses revealed the precise binding site of XTR1 and nucleotides critical for the binding within the <i>xyn1</i> promoter. Moreover, competitive EMSAs indicated that XTR1 competes with the essential transactivator XYR1 for binding to the <i>xyn1</i> promoter.</p><h3>Conclusions</h3><p>XTR1 represents a new transcriptional repressor specific for controlling xylanase gene expression. Isolation and functional characterization of this new factor not only contribute to further understanding the stringent regulatory network of xylanase genes, but also provide important clues for boosting xylanase biosynthesis in <i>T. reesei</i>.</p></div>","PeriodicalId":494,"journal":{"name":"Biotechnology for Biofuels","volume":"16 1","pages":""},"PeriodicalIF":6.1000,"publicationDate":"2023-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10612264/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biotechnology for Biofuels","FirstCategoryId":"5","ListUrlMain":"https://link.springer.com/article/10.1186/s13068-023-02417-w","RegionNum":1,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Background

The well-known industrial fungus Trichoderma reesei has an excellent capability of secreting a large amount of cellulases and xylanases. The induced expression of cellulase and xylanase genes is tightly controlled at the transcriptional level. However, compared to the intensive studies on the intricate regulatory mechanism of cellulase genes, efforts to understand how xylanase genes are regulated are relatively limited, which impedes the further improvement of xylanase production by T. reesei via rational strain engineering.

Results

To identify transcription factors involved in regulating xylanase gene expression in T. reesei, yeast one-hybrid screen was performed based on the promoters of two major extracellular xylanase genes xyn1 and xyn2. A putative transcription factor named XTR1 showing significant binding capability to the xyn1 promoter but not that of xyn2, was successfully isolated. Deletion of xtr1 significantly increased the transcriptional level of xyn1, but only exerted a minor promoting effect on that of xyn2. The xylanase activity was increased by ~ 50% with XTR1 elimination but the cellulase activity was hardly affected. Subcellular localization analysis of XTR1 fused to a green fluorescence protein demonstrated that XTR1 is a nuclear protein. Further analyses revealed the precise binding site of XTR1 and nucleotides critical for the binding within the xyn1 promoter. Moreover, competitive EMSAs indicated that XTR1 competes with the essential transactivator XYR1 for binding to the xyn1 promoter.

Conclusions

XTR1 represents a new transcriptional repressor specific for controlling xylanase gene expression. Isolation and functional characterization of this new factor not only contribute to further understanding the stringent regulatory network of xylanase genes, but also provide important clues for boosting xylanase biosynthesis in T. reesei.

Abstract Image

Abstract Image

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
一种新的转录抑制因子特异性调控里氏木霉木聚糖酶基因1。
背景:众所周知的工业真菌里氏木霉具有分泌大量纤维素酶和木聚糖酶的优良能力。纤维素酶和木聚糖酶基因的诱导表达在转录水平上受到严格控制。然而,与对纤维素酶基因复杂调控机制的深入研究相比,了解木聚糖酶基因如何调控的努力相对有限,这阻碍了里氏木霉通过合理的菌株工程进一步提高木聚糖酶的产量。结果:为了鉴定参与调节里氏木聚糖酶基因表达的转录因子,基于两个主要胞外木聚糖酶的基因xyn1和xyn2的启动子进行了酵母一杂交筛选。成功分离出一种名为XTR1的假定转录因子,该转录因子对xyn1启动子具有显著的结合能力,但对xyn2没有结合能力。xtr1的缺失显著提高了xyn1的转录水平,但仅对xyn2的转录水平产生了轻微的促进作用。木聚糖酶活性通过 ~ XTR1消除50%,但纤维素酶活性几乎不受影响。与绿色荧光蛋白融合的XTR1的亚细胞定位分析表明XTR1是核蛋白。进一步的分析揭示了XTR1的精确结合位点和对xyn1启动子内的结合至关重要的核苷酸。此外,竞争性EMSA表明XTR1与必需的反式激活剂XYR1竞争结合xyn1启动子。结论:XTR1是一种新的调控木聚糖酶基因表达的转录抑制因子。该新因子的分离和功能鉴定不仅有助于进一步了解木聚糖酶基因的严格调控网络,而且为促进里氏木聚糖酶的生物合成提供了重要线索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Biotechnology for Biofuels
Biotechnology for Biofuels 工程技术-生物工程与应用微生物
自引率
0.00%
发文量
0
审稿时长
2.7 months
期刊介绍: Biotechnology for Biofuels is an open access peer-reviewed journal featuring high-quality studies describing technological and operational advances in the production of biofuels, chemicals and other bioproducts. The journal emphasizes understanding and advancing the application of biotechnology and synergistic operations to improve plants and biological conversion systems for the biological production of these products from biomass, intermediates derived from biomass, or CO2, as well as upstream or downstream operations that are integral to biological conversion of biomass. Biotechnology for Biofuels focuses on the following areas: • Development of terrestrial plant feedstocks • Development of algal feedstocks • Biomass pretreatment, fractionation and extraction for biological conversion • Enzyme engineering, production and analysis • Bacterial genetics, physiology and metabolic engineering • Fungal/yeast genetics, physiology and metabolic engineering • Fermentation, biocatalytic conversion and reaction dynamics • Biological production of chemicals and bioproducts from biomass • Anaerobic digestion, biohydrogen and bioelectricity • Bioprocess integration, techno-economic analysis, modelling and policy • Life cycle assessment and environmental impact analysis
期刊最新文献
Sequential pretreatment with hydroxyl radical and manganese peroxidase for the efficient enzymatic saccharification of corn stover Enhancement of non-oleaginous green microalgae Ulothrix for bio-fixing CO2 and producing biofuels by ARTP mutagenesis Potential, economic and ecological benefits of sweet sorghum bio-industry in China Production and characterization of novel/chimeric sophorose–rhamnose biosurfactants by introducing heterologous rhamnosyltransferase genes into Starmerella bombicola Simultaneous saccharification and fermentation for d-lactic acid production using a metabolically engineered Escherichia coli adapted to high temperature
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1