Ulrich Zander, Gleb Bourenkov, Alexander N Popov, Daniele de Sanctis, Olof Svensson, Andrew A McCarthy, Ekaterina Round, Valentin Gordeliy, Christoph Mueller-Dieckmann, Gordon A Leonard
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引用次数: 0
Abstract
Here, an automated procedure is described to identify the positions of many cryocooled crystals mounted on the same sample holder, to rapidly predict and rank their relative diffraction strengths and to collect partial X-ray diffraction data sets from as many of the crystals as desired. Subsequent hierarchical cluster analysis then allows the best combination of partial data sets, optimizing the quality of the final data set obtained. The results of applying the method developed to various systems and scenarios including the compilation of a complete data set from tiny crystals of the membrane protein bacteriorhodopsin and the collection of data sets for successful structure determination using the single-wavelength anomalous dispersion technique are also presented.
本文介绍了一种自动程序,可用于确定安装在同一样品支架上的许多低温冷却晶体的位置,快速预测和排列它们的相对衍射强度,并根据需要从众多晶体中收集部分 X 射线衍射数据集。随后的分层聚类分析可对部分数据集进行最佳组合,优化最终数据集的质量。此外,还介绍了将所开发的方法应用于各种系统和情况的结果,包括从膜蛋白细菌眼色素的微小晶体中汇编完整的数据集,以及利用单波长反常色散技术收集数据集以成功确定结构。
期刊介绍:
Acta Crystallographica Section D welcomes the submission of articles covering any aspect of structural biology, with a particular emphasis on the structures of biological macromolecules or the methods used to determine them.
Reports on new structures of biological importance may address the smallest macromolecules to the largest complex molecular machines. These structures may have been determined using any structural biology technique including crystallography, NMR, cryoEM and/or other techniques. The key criterion is that such articles must present significant new insights into biological, chemical or medical sciences. The inclusion of complementary data that support the conclusions drawn from the structural studies (such as binding studies, mass spectrometry, enzyme assays, or analysis of mutants or other modified forms of biological macromolecule) is encouraged.
Methods articles may include new approaches to any aspect of biological structure determination or structure analysis but will only be accepted where they focus on new methods that are demonstrated to be of general applicability and importance to structural biology. Articles describing particularly difficult problems in structural biology are also welcomed, if the analysis would provide useful insights to others facing similar problems.