{"title":"Discrimination Between Competing Model Structures of Biological Systems in the Presence of Population Heterogeneity","authors":"Marc Martin-Casas, A. Mesbah","doi":"10.1109/LLS.2016.2644645","DOIUrl":null,"url":null,"abstract":"Computational models are useful for quantitative elucidation of the dynamical behavior of biological systems. Oftentimes, several competing models (i.e., hypotheses) are proposed to describe the underlying molecular mechanisms of a biological system. Selecting the most representative model is imperative for obtaining meaningful quantitative insights into the dynamics of the system of interest. However, the discrimination between competing models poses a significant challenge due to heterogeneity that is intrinsic to biological systems. This letter demonstrates the effectiveness of a probabilistic approach to optimal experiment design for model discrimination in the presence of time-invariant cell-to-cell differences within a cell population. The JAK2/STAT5 signaling pathway, which is involved in proliferation and differentiation of hematopoietic stem cells, is used as a case study.","PeriodicalId":87271,"journal":{"name":"IEEE life sciences letters","volume":"2 1","pages":"23-26"},"PeriodicalIF":0.0000,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/LLS.2016.2644645","citationCount":"7","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE life sciences letters","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/LLS.2016.2644645","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 7
Abstract
Computational models are useful for quantitative elucidation of the dynamical behavior of biological systems. Oftentimes, several competing models (i.e., hypotheses) are proposed to describe the underlying molecular mechanisms of a biological system. Selecting the most representative model is imperative for obtaining meaningful quantitative insights into the dynamics of the system of interest. However, the discrimination between competing models poses a significant challenge due to heterogeneity that is intrinsic to biological systems. This letter demonstrates the effectiveness of a probabilistic approach to optimal experiment design for model discrimination in the presence of time-invariant cell-to-cell differences within a cell population. The JAK2/STAT5 signaling pathway, which is involved in proliferation and differentiation of hematopoietic stem cells, is used as a case study.