S. Saito, Hiroaki Nakamura, T. Kenmotsu, Y. Oya, Y. Hatano, Y. Tamura, Susumu Fujiwara, H. Ohtani
{"title":"Image processing method for automatic measurement of number of DNA breaks","authors":"S. Saito, Hiroaki Nakamura, T. Kenmotsu, Y. Oya, Y. Hatano, Y. Tamura, Susumu Fujiwara, H. Ohtani","doi":"10.15748/jasse.8.173","DOIUrl":null,"url":null,"abstract":". The number of double - strand breaks can be evaluated from the change of average DNA length. The average DNA length is measured by the single - molecule observation method using fluorescence microscope. The measurement of DNA length in the microscope images is done manually by experienced operators and it is time consuming in many experi-ments. An image processing method using OpenCV library to measure length of DNA in fluorescence microscope images is developed in this paper. An automation of measurement using deep learning is also proposed.","PeriodicalId":41942,"journal":{"name":"Journal of Advanced Simulation in Science and Engineering","volume":"1 1","pages":""},"PeriodicalIF":0.4000,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Advanced Simulation in Science and Engineering","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.15748/jasse.8.173","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"ENGINEERING, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
. The number of double - strand breaks can be evaluated from the change of average DNA length. The average DNA length is measured by the single - molecule observation method using fluorescence microscope. The measurement of DNA length in the microscope images is done manually by experienced operators and it is time consuming in many experi-ments. An image processing method using OpenCV library to measure length of DNA in fluorescence microscope images is developed in this paper. An automation of measurement using deep learning is also proposed.