{"title":"Identification of the Factors Responsible for the Interaction of Hsp90α and its Client Proteins","authors":"Ashutosh Shukla, S. Paul","doi":"10.2174/1875036201408010006","DOIUrl":null,"url":null,"abstract":"Hsp90 is a stress protein that acts as a molecular chaperone and is known to assist in the maturation, folding and stabilization of various cellular proteins known as ‘client proteins’. However, the factors that drive the interaction between Hsp90 and its client proteins are not well understood. In the present investigation, we predicted the basis of the different interaction of Hsp90 with both wild and mutant p53 and other client proteins. We have predicted that the presence of hydrophobic patches having substantial value of hydropathy index and a minimum percent similarity of hydrophobic patches between Hsp90 and its client proteins of 40 % is a necessary condition for client proteins to be recognized by Hsp90 . We also predicted that the overall percentage hydrophobicity of client proteins more than 20 is a required condition for them to bind with Hsp90 . The docking energy of p53 with Hsp90 and with multi-chaperone complex was also separately reported. We have reported from docking result that mutant p53 has a stronger interaction with Hsp90 when associated with multi-chaperone complex than wild type p53 and this might be one of the causes of breast cancer pathogenesis.","PeriodicalId":38956,"journal":{"name":"Open Bioinformatics Journal","volume":"8 1","pages":"6-15"},"PeriodicalIF":0.0000,"publicationDate":"2014-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Open Bioinformatics Journal","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2174/1875036201408010006","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Computer Science","Score":null,"Total":0}
引用次数: 0
Abstract
Hsp90 is a stress protein that acts as a molecular chaperone and is known to assist in the maturation, folding and stabilization of various cellular proteins known as ‘client proteins’. However, the factors that drive the interaction between Hsp90 and its client proteins are not well understood. In the present investigation, we predicted the basis of the different interaction of Hsp90 with both wild and mutant p53 and other client proteins. We have predicted that the presence of hydrophobic patches having substantial value of hydropathy index and a minimum percent similarity of hydrophobic patches between Hsp90 and its client proteins of 40 % is a necessary condition for client proteins to be recognized by Hsp90 . We also predicted that the overall percentage hydrophobicity of client proteins more than 20 is a required condition for them to bind with Hsp90 . The docking energy of p53 with Hsp90 and with multi-chaperone complex was also separately reported. We have reported from docking result that mutant p53 has a stronger interaction with Hsp90 when associated with multi-chaperone complex than wild type p53 and this might be one of the causes of breast cancer pathogenesis.
期刊介绍:
The Open Bioinformatics Journal is an Open Access online journal, which publishes research articles, reviews/mini-reviews, letters, clinical trial studies and guest edited single topic issues in all areas of bioinformatics and computational biology. The coverage includes biomedicine, focusing on large data acquisition, analysis and curation, computational and statistical methods for the modeling and analysis of biological data, and descriptions of new algorithms and databases. The Open Bioinformatics Journal, a peer reviewed journal, is an important and reliable source of current information on the developments in the field. The emphasis will be on publishing quality articles rapidly and freely available worldwide.