A Rapid Genetic Screen Using Wisconsin Fast Plants®: A Hands-On Approach to Inheritance of de novo Mutations

CourseSource Pub Date : 2022-01-01 DOI:10.24918/cs.2022.28
Amy L. Klocko
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Abstract

Some concepts in genetics, such as genetic screens, are complex for students to visualize in a classroom and can be cumbersome to undertake in the laboratory. Typically, very large populations are needed, which can be addressed by using micro-organisms. However, students can struggle with phenotyping microbes. For macroscopic organisms, the number of offspring produced, and the generation time can be challenging. I developed this lesson as a small-scale genetic screen of Fast Plants®. These plants are amenable to teaching labs as they have simple growth requirements, a short generation time, and produce numerous seeds that can be stored for years. Seeds used for this screen are purchased pre-treated with a DNA damaging agent, removing the need for in-house use of mutagens. Also, students can screen the phenotypes without specialized equipment. The initial lesson begins with an examination of the first generation of plants. Later their offspring are screened for altered phenotypes. Students responded well to having full-grown plants available on the first day of the lab project. This lesson fostered student collaboration, as they worked with class datasets. Differences in growth due to mutagenesis treatment in the first generation were clear to students who had not worked with plants before. Identifying plants with altered phenotypes in the next generation was more of a challenge. This lesson incorporates key concepts such as somatic and germline mutations, the impact of such mutations on phenotype, and the inheritance of mutation alleles, and provides a hands-on way to illustrate these concepts. Citation: Klocko AL. 2022. A Rapid Genetic Screen Using Wisconsin Fast Plants®: A Hands-On Approach to Inheritance of de novo Mutations. CourseSource 9. https://doi.org/10.24918/ cs.2022.28 Editor: Rachelle Spell, Emory University Received: 6/18/2021; Accepted: 4/5/2022; Published: 10/3/2022 Copyright: © 2022 Klocko. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original author and source are credited. Conflict of Interest and Funding Statement: The author does not have a financial, personal, or professional conflict of interest related to this work. Supporting Materials: S1. Fast Plant Screen – Introductory slides; S2. Fast Plant Screen – Supply list; S3. Fast Plant Screen – M1 planting scheme; S4. Fast Plant Screen – M1 data collection spreadsheet; S5. Fast Plant Screen – M1 generation lab packet; S6. Fast Plant Screen – M2 generation lab packet; S7. Fast Plant Screen – How to create a randomized planting plan; S8. Fast Plant Screen – Rubric for evaluating hypothesis and graphic, and example hypotheses. *Correspondence to: Amy L. Klocko, Department of Biology, University of Colorado Colorado Springs, 1420 Austin Bluffs Parkway, Colorado Springs, CO 80918 CourseSource | www.coursesource.org 2022 | Volume 09 1 Lesson
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使用威斯康辛快速植物®的快速基因筛选:从头突变遗传的动手方法
遗传学中的一些概念,如基因筛选,对于学生来说在课堂上可视化是复杂的,在实验室中进行可能是麻烦的。通常,需要非常大的种群,这可以通过使用微生物来解决。然而,学生们可能会与微生物的表型相斗争。对于宏观生物来说,产生的后代数量和世代时间可能具有挑战性。我将此课程开发为Fast Plants®的小型遗传筛选。这些植物适合教学实验室,因为它们的生长要求简单,繁殖时间短,并且产生许多可以储存多年的种子。用于此筛选的种子是用DNA损伤剂预处理的,无需内部使用诱变剂。此外,学生可以在没有专门设备的情况下筛选表型。第一堂课从对第一代植物的考察开始。之后,对它们的后代进行表型改变筛查。在实验项目的第一天,学生们对完全成熟的植物反应良好。这节课培养了学生的合作,因为他们使用课堂数据集。对于以前没有接触过植物的学生来说,第一代诱变处理导致的生长差异是显而易见的。鉴定下一代表型改变的植物是一个更大的挑战。本课结合了关键概念,如体细胞和种系突变,这种突变对表型的影响,以及突变等位基因的遗传,并提供了一个动手的方式来说明这些概念。引用本文:Klocko AL. 2022。使用威斯康辛快速植物®的快速基因筛选:从头突变遗传的动手方法。CourseSource 9。https://doi.org/10.24918/ cs.2022.28编辑:Rachelle Spell, Emory University收稿日期:6/18/2021;接受:4/5/2022;发布日期:10/3/2022版权所有:©2022 Klocko。这是一篇在知识共享署名-非商业-相同方式共享4.0国际许可协议下发布的开放获取文章,该协议允许在任何媒体上不受限制的非商业使用、分发和复制,前提是要注明原作者和来源。利益冲突和资金声明:作者与这项工作没有财务、个人或专业利益冲突。支持材料:S1;快速植物筛选-介绍幻灯片;S2。快速工厂筛选-供应清单;S3。快速植物筛选- M1种植方案;S4。快速工厂筛选- M1数据收集电子表格;S5。快速植物筛选- M1代实验室包;S6。快速植物筛选- M2代实验室包;S7。快速植物筛选-如何创建一个随机种植计划;S8。快速植物筛选。评估假设和图形以及示例假设的准则*通信:Amy L. Klocko,生物系,科罗拉多大学科罗拉多斯普林斯分校,1420 Austin Bluffs Parkway,科罗拉多斯普林斯,CO 80918课程来源| www.coursesource.org 2022 |卷091课
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