Molecular Biomarkers Detected Using Fluorescence in situ Hybridization in a Filipino with Retinoblastoma.

IF 4.7 2区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Molecular Structure Pub Date : 2024-06-14 eCollection Date: 2024-01-01 DOI:10.47895/amp.vi0.7666
Arnold Dominic A Barzaga, Glenmarie Angelica S Perias, Lia Angela E Reyes, Patrick Gabriel G Moreno, Patrick R Relacion, Richelle Ann M Manalo, Yasmyne C Ronquillo, Francisco M Heralde
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Abstract

Background and objective: Retinoblastoma is one of the most common intraocular cancers among children usually caused by the loss of retinoblastoma protein function. Despite being a highly heritable disease, conventional diagnostic and prognostic methods depend on clinical examination, with limited consideration of cancer genetics in the standard of care. CD133, KRT19, and MUC1 are commonly explored genes for their utility in liquid biopsies of cancer including lung adenocarcinoma. To date, there are few extensive molecular studies on retinoblastoma in Filipino patients. To this end, the study aimed to describe the copy number of CD133, KRT19, and MUC1 in retinoblastoma samples from a Filipino patient and quantitate the respective expression level of these genes.

Methods: Hematoxylin & Eosin (H&E) staining was utilized to characterize the retinoblastoma tissue while fluorescence in situ hybridization (FISH) using probes specific to CD133, KRT19, and MUC1 was performed to determine the copy number of genes in retinoblastoma samples from a Filipino patient (n = 1). The gene expression of CD133, MUC1, and KRT19 was quantitated using RT-qPCR.

Results: The H&E staining in the retinoblastoma tissue shows poorly differentiated cells with prominent basophilic nuclei. CD133 was approximately 1.5-fold overexpressed in the retinoblastoma tissue with respect to the normal tissue, while MUC1 and KRT19 are only slightly expressed. Multiple intense signals of each probe were localized in the same nuclear areas throughout the retinoblastoma tissue, with high background noise.

Conclusion: These findings suggest that CD133 is a potential biomarker for the staging and diagnosis of retinoblastoma in Filipino cancer patients. However, further optimization of the hybridization procedures is recommended.

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利用荧光原位杂交技术检测菲律宾视网膜母细胞瘤患者的分子生物标记物
背景和目的:视网膜母细胞瘤是儿童中最常见的眼内癌之一,通常由视网膜母细胞瘤蛋白功能丧失引起。尽管视网膜母细胞瘤是一种高度遗传性疾病,但传统的诊断和预后方法依赖于临床检查,在标准治疗中对癌症遗传学的考虑有限。CD133、KRT19 和 MUC1 是常用的癌症液体活检基因,包括肺腺癌。迄今为止,有关菲律宾患者视网膜母细胞瘤的广泛分子研究还很少。为此,本研究旨在描述菲律宾患者视网膜母细胞瘤样本中 CD133、KRT19 和 MUC1 的拷贝数,并量化这些基因各自的表达水平。方法:利用血色素和伊红(H&E)染色法确定视网膜母细胞瘤组织的特征,同时使用 CD133、KRT19 和 MUC1 的特异性探针进行荧光原位杂交(FISH),以确定菲律宾患者(n = 1)视网膜母细胞瘤样本中基因的拷贝数。使用 RT-qPCR 对 CD133、MUC1 和 KRT19 的基因表达进行了定量:结果:视网膜母细胞瘤组织的 H&E 染色显示细胞分化较差,嗜碱性核突出。与正常组织相比,CD133在视网膜母细胞瘤组织中过表达约1.5倍,而MUC1和KRT19仅轻微表达。在整个视网膜母细胞瘤组织中,每个探针的多个高强度信号定位于相同的核区,背景噪声很高:这些发现表明,CD133 是菲律宾癌症患者视网膜母细胞瘤分期和诊断的潜在生物标记物。不过,建议进一步优化杂交程序。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Molecular Structure
Journal of Molecular Structure 化学-物理化学
CiteScore
7.10
自引率
15.80%
发文量
2384
审稿时长
45 days
期刊介绍: The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including: • Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.) • Chemical intermediates • Molecules in excited states • Biological molecules • Polymers. The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example: • Infrared spectroscopy (mid, far, near) • Raman spectroscopy and non-linear Raman methods (CARS, etc.) • Electronic absorption spectroscopy • Optical rotatory dispersion and circular dichroism • Fluorescence and phosphorescence techniques • Electron spectroscopies (PES, XPS), EXAFS, etc. • Microwave spectroscopy • Electron diffraction • NMR and ESR spectroscopies • Mössbauer spectroscopy • X-ray crystallography • Charge Density Analyses • Computational Studies (supplementing experimental methods) We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.
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