Genetic relationships of Iranian endemic mint species, Mentha mozaffariani Jamzad and some other mint species revealed by ISSR markers

Q3 Agricultural and Biological Sciences BioTechnologia Pub Date : 2019-01-01 DOI:10.5114/BTA.2019.83208
A. Choupani, A. Shojaeiyan, M. Maleki
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引用次数: 7

Abstract

Mint species (Mentha sp.) are important vegetables with medicinal and economic characteristics. In this study, the genetic relationships of 34 accessions of 5 mint species including Mentha spicata, Mentha longifolia, Mentha piperita, Mentha aquatica, and Mentha mozaffarianii Jamzad were evaluated using Inter-Simple Sequence Repeat (ISSR) markers, followed by the analysis of the polymerase chain reaction (PCR) products on a high-resolution acrylamide gel. ISSR primers yielded 74 clear and reproducible bands, of which 50 bands were polymorph (65.28%), with a minimum of 7 ((TG)8G) and a maximum of 17 ((GA)8YC) bands per primer. Polymorphism information content (PIC) for each primer varied from 0.37 to 0.46 with an average of 0.41. The marker index referred to (GA)8YC primer as the most efficient compared to others. The analysis of the molecular variance (AMOVA) at the species level showed that variation within the species (75%) exhibits greater partitioning than the variation among species (15%). The cluster analysis performed was based on Nei’s genetic distances using the unweighted pair group method with arithmetic mean (UPGMA) method. At the accession level, all 34 accessions were separated into 3 main clusters. The cluster analysis at the species level placed 3 species including M. aquatica, M. longifolia, and M. spicata in one common group. Based on the cluster analysis, the M. mozaffarianii Jamzad, as an Iranian species, was placed in Mentha section, closer to other species, when compared to M. piperita. The results indicated that ISSR markers alongside a high-resolution electrophoresis can be truly helpful in visualizing the diversity among different accessions of one species.
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伊朗薄荷特有种Mentha mozaffariani Jamzad与其他薄荷品种ISSR标记的亲缘关系
薄荷属植物(Mentha sp.)是具有药用和经济价值的重要蔬菜。本研究利用ISSR (intersimple Sequence Repeat)对5种薄荷(Mentha spicata, Mentha longifolia, Mentha piperita, Mentha aquatica, Mentha mozaffarianii Jamzad) 34份材料的亲缘关系进行了分析,并在高分辨率丙烯酰胺凝胶上对聚合酶链反应(PCR)产物进行了分析。ISSR引物共获得74条清晰、可重复的条带,其中多态性条带50条(65.28%),每个引物最少7条((TG)8G),最多17条((GA)8YC)。各引物的多态性信息含量(PIC)变化范围为0.37 ~ 0.46,平均为0.41。标记指数表明(GA)8YC引物效率最高。物种水平的分子变异分析表明,种内变异(75%)比种间变异(15%)具有更大的分异性。聚类分析基于Nei’s遗传距离,采用UPGMA (unweighted pair group method with arithmetic mean)方法。在爬树水平上,34个爬树被划分为3个主要聚类。在种水平上,聚类分析将水木、长叶木和spicata 3种聚在同一类群中。聚类分析结果表明,莫札法里亚蠓属伊朗种,位于门沙区,与其他种距离较近。结果表明,ISSR标记与高分辨率电泳相结合,可以真正帮助可视化同一物种不同种质间的多样性。
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来源期刊
BioTechnologia
BioTechnologia Agricultural and Biological Sciences-Plant Science
CiteScore
1.60
自引率
0.00%
发文量
8
审稿时长
8 weeks
期刊介绍: BIOTECHNOLOGIA – a high standard, peer-reviewed, quarterly magazine, providing a medium for the rapid publication of research reports and review articles on novel and innovative aspects of biotechnology, computational biology and bionanotechnology.
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