Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal.

Journal of Genomics Pub Date : 2023-11-01 eCollection Date: 2023-01-01 DOI:10.7150/jgen.88302
Diariatou Niang, Abdellatif Gueddou, Nogaye Niang, Darius Nzepang, Aissatou Sambou, Adama Diouf, Arlette Z Zaiya, Maimouna Cissoko, Djamel Gully, Joel-Romaric Nguepjop, Sergio Svistoonoff, Daniel Fonceka, Valérie Hocher, Diégane Diouf, Saliou Fall, Louis S Tisa
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Abstract

A new Bradyrhizobium vignae strain called ISRA400 was isolated from groundnut (Arachis hypogaea L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the Arachis hypogaea variety Fleur11. These findings suggest the potential of Bradyrhizobium vignae strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop.

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从塞内加尔花生种植区分离的优质固氮细菌慢生根瘤菌ISRA 400菌株的永久基因组序列草案。
从花生(Arachis hypogaea L.)根瘤中分离出一种新的慢生根瘤菌菌株ISRA400,该根瘤是通过从塞内加尔花生盆地采集的土壤样本中捕获细菌而获得的。在本研究中,我们提出了该菌株ISRA400的基因组序列草案,其跨度约为7.9 Mbp,G+C含量为63.4%。基因组分析显示存在48个tRNA基因和一个rRNA操纵子(16S、23S和5S)。结瘤试验表明,该菌株ISRA400显著提高了花生品种Fleur11的结瘤参数和叶绿素含量。这些发现表明,慢生根瘤菌菌株ISRA400有潜力成为提高花生作物生长和生产力的有效共生伙伴。
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来源期刊
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发文量
11
审稿时长
12 weeks
期刊介绍: Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.
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