ARMS-PCR based diagnosis of APCB and KRAS genes in colorectal cancer patients in Iraqi Sulaimania province

G. Salih, Shad Sudad
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Abstract

Amplification Refractory Mutation System (ARMS) assay is achieved for 30 blood samples of colorectal cancer (CRC) patients including 17 male and 13 female in order to determine the mutations in APCB gene and a proto-oncogene KRAS . ARMS-PCR analysis shows that all 30 samples are negative for I1307K variant ( APCB ) and seven common mutations in codons 12 and 13 ( APCB ). In addition two CRC patient samples are randomly chosen and purified for sequencing at Genome Center/KOYA University, then the sequence of the samples were BLAST on NCBI Website. The sequence alignment showed that both samples were wild for I1307K ( APCB ) and (G12S, G12C, G12A, G12D, G12V, G13D) ( KRAS ). We believe that these variants might absent in CRC patients of Iraqi Sulaimania province.
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基于ARMS-PCR的伊拉克苏莱曼尼亚省结直肠癌患者APCB和KRAS基因诊断
为了确定APCB基因和原癌基因KRAS的突变,对30例结直肠癌(CRC)患者(男性17例,女性13例)的血液样本进行了扩增难解突变系统(ARMS)检测。ARMS-PCR分析结果显示,30份样本均为I1307K变异(APCB)阴性,密码子12和13共有7个突变(APCB)阴性。另外,随机选取2例CRC患者样本,在KOYA大学基因组中心进行纯化测序,并在NCBI网站上BLAST测序。序列比对结果表明,I1307K (APCB)和(G12S, G12C, G12A, G12D, G12V, G13D) (KRAS)均为野生菌株。我们认为这些变异可能在伊拉克苏莱曼尼亚省的结直肠癌患者中不存在。
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