The molecular mechanism of Gegen Qinlian Decoction in the treatment of radiation enteritis based on network pharmacology

Muyao Zhang
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Abstract

PrObjective This study aimed to explore the potential mechanism of Gegen Qinlian Decoction in the treatment of radiation enteritis by means of network pharmacology. Methods The Chinese Medicine System Pharmacology Database and Analysis Platform was used to search the active ingredients and targets of Gegen Qinlian Decoction, and the relevant targets of radiation enteritis were searched online through the GeneCards and OMIM databases. Cytoscape 3.7.0 software was used to construct the interaction network of “Gegen Qinlian Decoction-active ingredient-radiation enteritis-target,” and the PPI visualization network diagram of the interaction between target and protein was drawn through STRING database analysis. R language was used to analyze the intersection of drug targets and disease targets to enrich the GO and KEGG pathways of core target genes. Results The search results obtained 146 effective active ingredients of Gegen Qinlian Decoction, including formononetin, β-sitosterol, 3'-methoxydaidzein, acacetin, 5,8,2'-trihydroxy-7-methoxyflavone, berberine, epiberberine, isorhamnetin, formononetin, kaempferol, and naringenin. The PPI network contained 101 nodes and 399 edges. The biological functions involved in GO enrichment analysis included nuclear receptor activity, ligand-activated transcription factor activity, ubiquitin-like protein ligase binding, DNA binding transcription activator activity, RNA polymerase II specific signaling, steroid hormone receptor activity, ubiquitin protein ligase binding, and activation transcription factor binding. The biological pathways and processes involved in KEGG included lipids and atherosclerosis, chemical carcinogenesis-receptor activation, fluid shear stress and atherosclerosis, Kaposi’s sarcoma-associated herpes virus infection, and apoptosis, TNF signaling pathway, and IL-17 signaling pathway. Conclusion The effective active ingredients in Gegen Qinlian Decoction treat radiation enteritis through multiple targets and pathways. This work provides a theoretical basis for further research on the effect and mechanism of Gegen Qinlian Decoction on radiation enteritis.
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基于网络药理学的葛根芩连汤治疗放射性肠炎的分子机制研究
目的利用网络药理学方法,探讨葛根芩连汤治疗放射性肠炎的可能机制。方法利用中药系统药理学数据库和分析平台对葛根芩连汤的有效成分和靶点进行检索,并通过GeneCards和OMIM数据库在线检索放射性肠炎相关靶点。采用Cytoscape 3.7.0软件构建“葛根芩连汤剂-活性成分-辐射肠炎-靶点”相互作用网络,通过STRING数据库分析绘制靶点与蛋白质相互作用的PPI可视化网络图。利用R语言分析药物靶点与疾病靶点的交集,丰富核心靶基因的GO和KEGG通路。结果检索得到葛根芩连汤有效活性成分146种,包括芒柄花素、β-谷甾醇、3′-甲氧基大豆苷、阿卡乙素、5,8,2′-三羟基-7-甲氧基黄酮、小檗碱、小檗碱、异鼠李素、芒柄花素、山奈酚、柚皮素。PPI网络包含101个节点和399条边。氧化石墨烯富集分析涉及的生物学功能包括核受体活性、配体活化的转录因子活性、泛素样蛋白连接酶结合、DNA结合转录激活因子活性、RNA聚合酶II特异性信号、类固醇激素受体活性、泛素蛋白连接酶结合和活化转录因子结合。KEGG参与的生物学途径和过程包括脂质和动脉粥样硬化、化学致癌受体激活、流体剪切应力和动脉粥样硬化、卡波西肉瘤相关疱疹病毒感染和细胞凋亡、TNF信号通路和IL-17信号通路。结论葛根芩连汤的有效成分对放射性肠炎具有多靶点、多途径的治疗作用。本工作为进一步研究葛根芩连汤治疗放射性肠炎的作用及机制提供了理论基础。
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