Nora Katia Saavedra del Aguila Hoffmann, I. C. Duarte, Maria Bernadete Amancio Veresche Silva
{"title":"Diversity of anoxygenic phototrophic bacteria in anaerobic lagoons and facultative stabilization pond used in treatment of sewage","authors":"Nora Katia Saavedra del Aguila Hoffmann, I. C. Duarte, Maria Bernadete Amancio Veresche Silva","doi":"10.22034/IJAB.V8I1.688","DOIUrl":null,"url":null,"abstract":"The objective of this study was to identify the anoxygenic phototrophic bacteria in the anaerobic lagoons and facultative stabilization pond of the Vale do Ribeira, Cajati, Sao Paulo, Brazil, and their correlation with physical and chemical parameters of the ponds’ water. The samples were collected seasonally (spring, summer, autumn and winter) in the sub-surface, intermediate layer and sediment-water interface. We used the PCR/DGGE with puf M 557FGC and puf M 750R primers specific to the reaction center of the photosynthetic phototrophic bacteria for their identification. The amplification products were separated by electrophoresis on denaturing gradient gel. From the bands cut out and sequenced from DGGE, the identified bacteria were Rhodopseudomonas palustris (99% similarity), Chromatium sp . (92%), Thiocapsa sp. (90%), Rhodospirillum sp. (95%), Roseobacter sp. (93%) and other uncultured bacteria.","PeriodicalId":36975,"journal":{"name":"International Journal of Aquatic Biology","volume":"149 1","pages":"9-17"},"PeriodicalIF":0.0000,"publicationDate":"2020-02-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Aquatic Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.22034/IJAB.V8I1.688","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Environmental Science","Score":null,"Total":0}
引用次数: 2
Abstract
The objective of this study was to identify the anoxygenic phototrophic bacteria in the anaerobic lagoons and facultative stabilization pond of the Vale do Ribeira, Cajati, Sao Paulo, Brazil, and their correlation with physical and chemical parameters of the ponds’ water. The samples were collected seasonally (spring, summer, autumn and winter) in the sub-surface, intermediate layer and sediment-water interface. We used the PCR/DGGE with puf M 557FGC and puf M 750R primers specific to the reaction center of the photosynthetic phototrophic bacteria for their identification. The amplification products were separated by electrophoresis on denaturing gradient gel. From the bands cut out and sequenced from DGGE, the identified bacteria were Rhodopseudomonas palustris (99% similarity), Chromatium sp . (92%), Thiocapsa sp. (90%), Rhodospirillum sp. (95%), Roseobacter sp. (93%) and other uncultured bacteria.
本研究的目的是鉴定巴西圣保罗Cajati的Vale do Ribeira厌氧泻湖和兼性稳定池中的无氧光养细菌及其与池塘水理化参数的相关性。样品按季节(春、夏、秋、冬)在地下、中间层和沉积物-水界面采集。我们用puf M 557FGC和puf M 750R对光合光养细菌反应中心特异引物进行PCR/DGGE鉴定。扩增产物经变性梯度凝胶电泳分离。从DGGE中剪切出的条带和测序结果中,鉴定出的细菌为古红假单胞菌(Rhodopseudomonas palustris)(99%相似度)、Chromatium sp .;(92%)、Thiocapsa sp.(90%)、Rhodospirillum sp.(95%)、Roseobacter sp.(93%)等未培养细菌。