Use of mitochondrial COI gene for the identification of family Salticidae and Lycosidae of spiders

IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Mitochondrial Dna Part a Pub Date : 2018-01-02 DOI:10.1080/24701394.2016.1248428
S. Naseem, H. M. Tahir
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引用次数: 9

Abstract

Abstract In recent years, DNA barcoding has become quite popular for molecular identification of species because it is simple, quick and an affordable method. Present study was conducted to identify spiders of most abundant families, i.e. Salticidae and Lycosidae from citrus orchards in Sargodha district using DNA barcoding. A total of 160 specimens were subjected to DNA barcoding but, sequences up to 600 bp were recovered for 156 specimens. This molecular approach proved helpful to assign the exact taxon to those specimens which were misidentified through morphological characters in the study. We were succeeded to discriminate six species of Lycosidae and nine species of Salticidae through DNA barcoding. Results revealed the presence of clear barcode gap (discontinuity in intra- and inter-specific divergences) for members of both families. Furthermore, the maximum intra-specific divergence was less than NN (nearest neighbour) distance for all species. This suggested the reliability of DNA barcoding for spider’s identification up to species level. We got 98% success in our study. It is concluded from present study that DNA barcoding is more reliable tool especially for immature spiders, when morphological characters are ambiguous.
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利用线粒体COI基因鉴定蜘蛛水蛭科和雪蛛科
摘要近年来,DNA条形码技术因其简单、快速、经济实惠等优点,在物种分子鉴定中得到了广泛的应用。本研究利用DNA条形码技术对Sargodha地区柑橘果园中最丰富的蜘蛛科(Salticidae和Lycosidae)进行了鉴定。对160份标本进行了DNA条形码分析,其中156份标本的DNA序列长度达600 bp。结果表明,这种分子鉴别方法有助于对因形态学特征而被误认的标本进行准确的分类。利用DNA条形码技术成功地鉴定出6种石蒜科和9种水蛭科植物。结果显示,两个科的成员都存在明显的条形码间隙(种内和种间差异的不连续)。此外,所有物种的最大种内差异均小于NN(最近邻)距离。这表明DNA条形码技术在蜘蛛物种鉴定上的可靠性。我们的学习成绩达到了98%。从目前的研究中得出结论,DNA条形码是更可靠的工具,特别是对未成熟的蜘蛛,当形态特征不明确时。
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来源期刊
Mitochondrial Dna Part a
Mitochondrial Dna Part a Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.00
自引率
0.00%
发文量
6
期刊介绍: Mitochondrial DNA Part A publishes original high-quality manuscripts on physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism, and/or interactions. Manuscripts on cytosolic and extracellular mtDNA, and on dysfunction caused by alterations in mtDNA integrity as well as methodological papers detailing novel approaches for mtDNA manipulation in vitro and in vivo are welcome. Descriptive papers on DNA sequences from mitochondrial genomes, and also analytical papers in the areas of population genetics, phylogenetics and human evolution that use mitochondrial DNA as a source of evidence for studies will be considered for publication. The Journal also considers manuscripts that examine population genetic and systematic theory that specifically address the use of mitochondrial DNA sequences, as well as papers that discuss the utility of mitochondrial DNA information in medical studies and in human evolutionary biology.
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