{"title":"Study of mitochondrial DNA (mtDNA) D - loop region polymorphism in Şavak Akkaraman sheep","authors":"S. Yagci, S. Baş, Selahaddin Ki̇raz","doi":"10.3906/vet-1905-57","DOIUrl":null,"url":null,"abstract":"This study was conducted to investigate the maternal genetic diversity using the mtDNA D - loop region 842 base pair bp polymorphism in Şavak Akkaraman sheep raised in the province of Erzincan. According to the results, in the mtDNA D - loop of the Şavak Akkaraman breed, 27 polymorphic sites and 20 haplotypes were identified and then, 11 of the 20 haplotypes identified in Şavak sheep were in haplogroup B 55% , 6 in haplogroup A 30% , and 3 in haplogroup C 15% . Haplogroup B was the most frequent haplogroup in Şavak Akkaraman sheep. Haplotype and nucleotide diversities were estimated to be 0.995 ± 0.004 and 0.0146 ± 0.0003, respectively. The Şavak Akkaraman breed was compared with the mtDNA sequencing of different breeds and wild sheep, and the contribution of the breed to biodiversity was considered.","PeriodicalId":23357,"journal":{"name":"Turkish Journal of Veterinary & Animal Sciences","volume":null,"pages":null},"PeriodicalIF":0.5000,"publicationDate":"2020-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Turkish Journal of Veterinary & Animal Sciences","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.3906/vet-1905-57","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"VETERINARY SCIENCES","Score":null,"Total":0}
引用次数: 2
Abstract
This study was conducted to investigate the maternal genetic diversity using the mtDNA D - loop region 842 base pair bp polymorphism in Şavak Akkaraman sheep raised in the province of Erzincan. According to the results, in the mtDNA D - loop of the Şavak Akkaraman breed, 27 polymorphic sites and 20 haplotypes were identified and then, 11 of the 20 haplotypes identified in Şavak sheep were in haplogroup B 55% , 6 in haplogroup A 30% , and 3 in haplogroup C 15% . Haplogroup B was the most frequent haplogroup in Şavak Akkaraman sheep. Haplotype and nucleotide diversities were estimated to be 0.995 ± 0.004 and 0.0146 ± 0.0003, respectively. The Şavak Akkaraman breed was compared with the mtDNA sequencing of different breeds and wild sheep, and the contribution of the breed to biodiversity was considered.
利用Erzincan省Şavak阿卡拉曼羊的mtDNA D -环区842碱基对bp多态性，对母系遗传多样性进行了研究。结果表明，在Şavak Akkaraman羊的mtDNA D -环中，鉴定出27个多态性位点和20个单倍型，其中，Şavak羊鉴定出的20个单倍型中，有11个在单倍群B中占55%，6个在单倍群A中占30%，3个在单倍群C中占15%。单倍群B是Şavak阿卡拉曼羊中最常见的单倍群。单倍型和核苷酸多样性分别为0.995±0.004和0.0146±0.0003。将Şavak Akkaraman品种与不同品种和野生羊的mtDNA序列进行比较，考虑该品种对生物多样性的贡献。
期刊介绍：
The Turkish Journal of Veterinary and Animal Sciences is published electronically 6 times a year by the Scientific and Technological Research Council of Turkey (TÜBİTAK).
Accepts English-language manuscripts on all aspects of veterinary medicine and animal sciences.
Contribution is open to researchers of all nationalities.
Original research articles, review articles, short communications, case reports, and letters to the editor are welcome.
Manuscripts related to economically important large and small farm animals, poultry, equine species, aquatic species, and bees, as well as companion animals such as dogs, cats, and cage birds, are particularly welcome.
Contributions related to laboratory animals are only accepted for publication with the understanding that the subject is crucial for veterinary medicine and animal science.
Manuscripts written on the subjects of basic sciences and clinical sciences related to veterinary medicine, nutrition, and nutritional diseases, as well as the breeding and husbandry of the above-mentioned animals and the hygiene and technology of food of animal origin, have priority for publication in the journal.
A manuscript suggesting that animals have been subjected to adverse, stressful, or harsh conditions or treatment will not be processed for publication unless it has been approved by an institutional animal care committee or the equivalent thereof.
The editor and the peer reviewers reserve the right to reject papers on ethical grounds when, in their opinion, the severity of experimental procedures to which animals are subjected is not justified by the scientific value or originality of the information being sought by the author(s).
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