Advanced Raman Spectroscopy Based on Transfer Learning by Using a Convolutional Neural Network for Personalized Colorectal Cancer Diagnosis

3区 物理与天体物理 Q1 Materials Science Progress in Optics Pub Date : 2023-04-27 DOI:10.3390/opt4020022
D. Kalatzis, E. Spyratou, M. Karnachoriti, M. Kouri, S. Orfanoudakis, Nektarios Koufopoulos, A. Pouliakis, N. Danias, I. Seimenis, A. Kontos, E. Efstathopoulos
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引用次数: 3

Abstract

Advanced Raman spectroscopy (RS) systems have gained new interest in the field of medicine as an emerging tool for in vivo tissue discrimination. The coupling of RS with artificial intelligence (AI) algorithms has given a boost to RS to analyze spectral data in real time with high specificity and sensitivity. However, limitations are still encountered due to the large amount of clinical data which are required for the pre-training process of AI algorithms. In this study, human healthy and cancerous colon specimens were surgically resected from different sites of the ascending colon and analyzed by RS. Two transfer learning models, the one-dimensional convolutional neural network (1D-CNN) and the 1D–ResNet transfer learning (1D-ResNet) network, were developed and evaluated using a Raman open database for the pre-training process which consisted of spectra of pathogen bacteria. According to the results, both models achieved high accuracy of 88% for healthy/cancerous tissue discrimination by overcoming the limitation of the collection of a large number of spectra for the pre-training process. This gives a boost to RS as an adjuvant tool for real-time biopsy and surgery guidance.
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基于卷积神经网络迁移学习的先进拉曼光谱在个体化结直肠癌诊断中的应用
先进的拉曼光谱(RS)系统作为一种新兴的体内组织识别工具在医学领域引起了新的关注。RS与人工智能(AI)算法的耦合使得RS能够实时分析光谱数据,具有较高的特异性和灵敏度。然而,由于人工智能算法的预训练过程需要大量的临床数据,因此仍然遇到了局限性。在本研究中,从升结肠的不同部位手术切除人类健康和癌结肠标本,并通过RS进行分析,开发了一维卷积神经网络(1D-CNN)和一维resnet迁移学习(1D-ResNet)网络两种迁移学习模型,并使用Raman开放数据库对其进行评估,用于包括病原体光谱的预训练过程。结果表明,两种模型都克服了在预训练过程中采集大量光谱的限制,实现了88%的健康/癌组织识别准确率。这促进了RS作为实时活检和手术指导的辅助工具。
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来源期刊
Progress in Optics
Progress in Optics 物理-光学
CiteScore
4.50
自引率
0.00%
发文量
8
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