TaqMan real-time PCR for detection of pathogenic Leptospira spp. in canine clinical samples.

IF 1.5 3区 农林科学 Q2 VETERINARY SCIENCES Onderstepoort Journal of Veterinary Research Pub Date : 2023-06-16 eCollection Date: 2023-06-01 DOI:10.2478/jvetres-2023-0024
Mohammad Sabri Abdul Rahman, Kuan Hua Khor, Siti Khairani-Bejo, Seng Fong Lau, Mazlina Mazlan, Mohd Azri Roslan, Mohd Mokrish Md Ajat, Mohd Akmal Mohd Noor
{"title":"TaqMan real-time PCR for detection of pathogenic <i>Leptospira</i> spp. in canine clinical samples.","authors":"Mohammad Sabri Abdul Rahman, Kuan Hua Khor, Siti Khairani-Bejo, Seng Fong Lau, Mazlina Mazlan, Mohd Azri Roslan, Mohd Mokrish Md Ajat, Mohd Akmal Mohd Noor","doi":"10.2478/jvetres-2023-0024","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Canine leptospirosis has always been a differential diagnosis in dogs presenting with clinical signs and blood profiles associated with kidney and/or liver disease. The conventional polymerase chain reaction (PCR) provides diagnoses, but real-time PCR-based tests provide earlier confirmation and determine the severity of infection, especially in the acute stage, allowing early detection for immediate treatment decisions. To our knowledge, real-time PCR has not been routinely adopted for clinical investigation in Malaysia. This study evaluated TaqMan real-time PCR (qPCR) assays diagnosing leptospirosis and compared their applicability to clinical samples from dogs with kidney and/or liver disease against a conventional PCR reference.</p><p><strong>Material and methods: </strong>The qPCR assays were validated using existing leptospiral isolates. Whole blood and urine samples were analysed using a conventional PCR, <i>LipL32(1)</i> and <i>LipL32(2)</i> qPCRs and a microscopic agglutination test. The sensitivity and specificity of the qPCRs were determined.</p><p><strong>Results: </strong>The <i>LipL32(1)</i> qPCR assay had more diagnostic value than the <i>LipL32(2)</i> qPCR assay. Further evaluation of this assay revealed that it could detect as low as five DNA copies per reaction with high specificity for the tested leptospiral strains. No cross-amplification was observed with other organisms. Analysing the clinical samples, the <i>LipL32(1)</i> qPCR assay had 100.0% sensitivity and >75.0% specificity.</p><p><strong>Conclusion: </strong>The <i>LipL32(1)</i> qPCR assay is sensitive, specific and has the potential to be applied in future studies.</p>","PeriodicalId":54685,"journal":{"name":"Onderstepoort Journal of Veterinary Research","volume":null,"pages":null},"PeriodicalIF":1.5000,"publicationDate":"2023-06-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10740327/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Onderstepoort Journal of Veterinary Research","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.2478/jvetres-2023-0024","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/6/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"VETERINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

Introduction: Canine leptospirosis has always been a differential diagnosis in dogs presenting with clinical signs and blood profiles associated with kidney and/or liver disease. The conventional polymerase chain reaction (PCR) provides diagnoses, but real-time PCR-based tests provide earlier confirmation and determine the severity of infection, especially in the acute stage, allowing early detection for immediate treatment decisions. To our knowledge, real-time PCR has not been routinely adopted for clinical investigation in Malaysia. This study evaluated TaqMan real-time PCR (qPCR) assays diagnosing leptospirosis and compared their applicability to clinical samples from dogs with kidney and/or liver disease against a conventional PCR reference.

Material and methods: The qPCR assays were validated using existing leptospiral isolates. Whole blood and urine samples were analysed using a conventional PCR, LipL32(1) and LipL32(2) qPCRs and a microscopic agglutination test. The sensitivity and specificity of the qPCRs were determined.

Results: The LipL32(1) qPCR assay had more diagnostic value than the LipL32(2) qPCR assay. Further evaluation of this assay revealed that it could detect as low as five DNA copies per reaction with high specificity for the tested leptospiral strains. No cross-amplification was observed with other organisms. Analysing the clinical samples, the LipL32(1) qPCR assay had 100.0% sensitivity and >75.0% specificity.

Conclusion: The LipL32(1) qPCR assay is sensitive, specific and has the potential to be applied in future studies.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
用于检测犬临床样本中致病性钩端螺旋体的 TaqMan 实时 PCR。
导言:犬钩端螺旋体病一直是出现与肾脏和/或肝脏疾病相关的临床症状和血液特征的犬的鉴别诊断方法。传统的聚合酶链反应(PCR)可提供诊断结果,但基于 PCR 的实时检测可更早地确认和确定感染的严重程度,尤其是在急性期,以便及早发现并立即做出治疗决定。据我们所知,马来西亚尚未将实时 PCR 常规用于临床调查。本研究评估了诊断钩端螺旋体病的 TaqMan 实时 PCR(qPCR)检测方法,并将其对患有肾脏和/或肝脏疾病的狗的临床样本的适用性与传统 PCR 参考方法进行了比较:使用现有的钩端螺旋体分离物对 qPCR 检测方法进行了验证。使用传统 PCR、LipL32(1) 和 LipL32(2) qPCR 以及显微凝集试验对全血和尿液样本进行了分析。测定了 qPCR 的灵敏度和特异性:结果:LipL32(1) qPCR 检测比 LipL32(2) qPCR 检测更有诊断价值。对该检测方法的进一步评估表明,它可以在每个反应中检测到低至 5 个 DNA 拷贝,对所检测的钩端螺旋体菌株具有高度特异性。没有观察到与其他生物的交叉扩增。在分析临床样本时,LipL32(1) qPCR 检测法的灵敏度为 100.0%,特异性大于 75.0%:结论:LipL32(1) qPCR 检测灵敏度高、特异性强,有望应用于未来的研究中。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
4.30
自引率
0.00%
发文量
13
审稿时长
16 weeks
期刊介绍: The Onderstepoort Journal of Veterinary Research, is the official publication of the Onderstepoort Veterinary Institute. While it considers submissions from any geographic region, its focus is on Africa and the infectious and parasitic diseases and disease vectors that affect livestock and wildlife on the continent.
期刊最新文献
Antioxidant properties, anti-nutritive and toxic factors of Terminalia sericea in Onderstepoort. Antibiotic resistance and mitigation using One Health lens in aquaculture of Northern Nigeria. Rabies in equids in Sudan. Applied One Health: Nigeria National Veterinary Research Institute COVID-19 pandemic response. Factors associated with the rabies vaccination status of dogs in households in Beni City, D.R. Congo.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1