Computational approaches for the systematic analysis of aging-associated molecular alterations

Q3 Pharmacology, Toxicology and Pharmaceutics Drug Discovery Today: Disease Models Pub Date : 2018-03-01 DOI:10.1016/j.ddmod.2019.03.003
Cédric Debès , Ana Carolina Leote , Andreas Beyer
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引用次数: 1

Abstract

Advanced computational approaches are needed to interpret the data generated by high-throughput molecular profiling methods. This necessity is particularly pressing in the field of aging research because (i) it is challenging to separate causes and consequences of aging, (ii) samples are often very precious, thus reducing the number of biological replicates, and (iii) heterogeneity between replicates can be particularly high at old age. Here, we describe computational approaches ranging from basic data processing up to the integration of heterogeneous data types. For future studies, we suggest to sample more time points and -omics layers, and to determine to what extent reference information from young animals can be transferred to old ones in data integration approaches.

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系统分析衰老相关分子变化的计算方法
需要先进的计算方法来解释高通量分子分析方法产生的数据。这种必要性在老龄化研究领域尤其紧迫,因为(i)区分衰老的原因和后果具有挑战性,(ii)样本通常非常宝贵,因此减少了生物重复的数量,(iii)重复之间的异质性在老年人中可能特别高。在这里,我们描述了从基本数据处理到异构数据类型集成的计算方法。对于未来的研究,我们建议采样更多的时间点和组学层,并确定在数据集成方法中,幼龄动物的参考信息在多大程度上可以转移到老年动物。
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Drug Discovery Today: Disease Models
Drug Discovery Today: Disease Models Pharmacology, Toxicology and Pharmaceutics-Drug Discovery
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期刊介绍: Drug Discovery Today: Disease Models discusses the non-human experimental models through which inference is drawn regarding the molecular aetiology and pathogenesis of human disease. It provides critical analysis and evaluation of which models can genuinely inform the research community about the direct process of human disease, those which may have value in basic toxicology, and those which are simply designed for effective expression and raw characterisation.
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