{"title":"Computational approaches for the systematic analysis of aging-associated molecular alterations","authors":"Cédric Debès , Ana Carolina Leote , Andreas Beyer","doi":"10.1016/j.ddmod.2019.03.003","DOIUrl":null,"url":null,"abstract":"<div><p>Advanced computational approaches are needed to interpret the data generated by high-throughput molecular profiling methods. This necessity is particularly pressing in the field of aging research because (i) it is challenging to separate causes and consequences of aging, (ii) samples are often very precious, thus reducing the number of biological replicates, and (iii) heterogeneity between replicates can be particularly high at old age. Here, we describe computational approaches ranging from basic data processing up to the integration of heterogeneous data types. For future studies, we suggest to sample more time points and -omics layers, and to determine to what extent reference information from young animals can be transferred to old ones in data integration approaches.</p></div>","PeriodicalId":39774,"journal":{"name":"Drug Discovery Today: Disease Models","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2018-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ddmod.2019.03.003","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Drug Discovery Today: Disease Models","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1740675718300148","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Pharmacology, Toxicology and Pharmaceutics","Score":null,"Total":0}
引用次数: 1
Abstract
Advanced computational approaches are needed to interpret the data generated by high-throughput molecular profiling methods. This necessity is particularly pressing in the field of aging research because (i) it is challenging to separate causes and consequences of aging, (ii) samples are often very precious, thus reducing the number of biological replicates, and (iii) heterogeneity between replicates can be particularly high at old age. Here, we describe computational approaches ranging from basic data processing up to the integration of heterogeneous data types. For future studies, we suggest to sample more time points and -omics layers, and to determine to what extent reference information from young animals can be transferred to old ones in data integration approaches.
期刊介绍:
Drug Discovery Today: Disease Models discusses the non-human experimental models through which inference is drawn regarding the molecular aetiology and pathogenesis of human disease. It provides critical analysis and evaluation of which models can genuinely inform the research community about the direct process of human disease, those which may have value in basic toxicology, and those which are simply designed for effective expression and raw characterisation.