MF2ResU-Net: A Multi-Feature Fusion Deep Learning Architecture for Retinal Blood Vessel Segmentation

Q3 Medicine Digital Chinese Medicine Pub Date : 2021-06-28 DOI:10.21203/rs.3.rs-627790/v1
Zhenchao Cui, Shujie Song, Liping Chen, Xiangyang Chen, Jing Qi
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Abstract

Segmentation of blood vessels becomes an essential step in computer aided diagnosis system for the diseases in several departments of ophthalmology, neurosurgery, oncology, cardiology, and laryngology. Aiming at the problem of insufficient segmentation of small blood vessels by existing methods, a novel method based on multi-module fusion residual neural network model (MF2ResU-Net) was proposed. In the proposed networks, to obtain refined features of vessels, three cascade connected U-Net networks were employed as main networks. To deal with the problem of over-fitting, residual paths were used in main networks. In the blocks of U-Net in MF2ResU-Net, in order to remove the semantic difference in low-level and high-level, shortcut connections were used to combine the encoder layers and decoder layers in the blocks. Furthermore, atrous spatial pyramid pooling was embedded between the encoder and decoder to achieve multi-scale feature of blood vessels. During the training of the networks, to deal with the imbalance between background and foreground, a novel joint loss function was proposed based on the dice and cost- sensitive, which could greatly reduce the impact of unbalance in classes of samples. In experiment section, two retinal datasets, DRIVE and CHASE DB1, were used to test our method, and experiments showed that MF2ResU-Net was superior to existing methods on the criteria of sensitivity (Sen), specificity (Spe), accuracy (Acc), and area under curve (AUC), the values of which are 0.8013 and 0.8102, 0.9842 and 0.9809, 0.9700 and 0.9776, and 0.9797 and 0.9837 respectively for DRIVE and CHASE DB1. The results of experiments demonstrated the effectiveness and robustness of the model in the segmentation of complex curvature and small blood vessels.
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MF2ResU-Net:一种用于视网膜血管分割的多特征融合深度学习架构
血管分割已成为眼科、神经外科、肿瘤科、心脏科、喉科等科室疾病计算机辅助诊断系统的重要环节。针对现有方法对小血管分割不足的问题,提出了一种基于多模块融合残差神经网络模型(MF2ResU-Net)的新方法。在该网络中,为了获得更精细的船舶特征,采用3个级联U-Net网络作为主网络。为了解决过拟合问题,在主网络中采用残差路径。在MF2ResU-Net的U-Net块中,为了消除低级和高级的语义差异,使用快捷连接将块中的编码器层和解码器层组合在一起。在编码器和解码器之间嵌入空间金字塔池,实现血管的多尺度特征。在网络的训练过程中,为了处理背景和前景之间的不平衡,提出了一种基于骰子和代价敏感的联合损失函数,可以大大减少样本类别不平衡的影响。实验部分采用DRIVE和CHASE DB1两个视网膜数据集对方法进行验证,实验结果表明,MF2ResU-Net在灵敏度(Sen)、特异度(Spe)、准确度(Acc)和曲线下面积(AUC)等指标上均优于现有方法,DRIVE和CHASE DB1分别为0.8013和0.8102、0.9842和0.9809、0.9700和0.9776、0.9797和0.9837。实验结果证明了该模型在复杂曲率和小血管分割中的有效性和鲁棒性。
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来源期刊
Digital Chinese Medicine
Digital Chinese Medicine Medicine-Complementary and Alternative Medicine
CiteScore
1.80
自引率
0.00%
发文量
126
审稿时长
63 days
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