{"title":"Oscillator death in coupled biochemical oscillators.","authors":"Tomáš Gedeon, Breschine Cummins","doi":"10.1007/s00498-023-00348-3","DOIUrl":null,"url":null,"abstract":"<p><p>Circadian rhythm, cell division and metabolic oscillations are rhythmic cellular behaviors that must be both robust but also to respond to changes in their environment. In this work, we study emergent behavior of coupled biochemical oscillators, modeled as repressilators. While more traditional approaches to oscillators synchronization often use phase oscillators, our approach uses switching systems that may be more appropriate for cellular networks dynamics governed by biochemical switches. We show that while one-directional coupling maintains stable oscillation of individual repressilators, there are well-characterized parameter regimes of mutually coupled repressilators, where oscillations stop. In other parameter regimes, joint oscillations continue. Our results may have implications for the understanding of condition-dependent coupling and un-coupling of regulatory networks.</p>","PeriodicalId":51123,"journal":{"name":"Mathematics of Control Signals and Systems","volume":"58 1","pages":"781-801"},"PeriodicalIF":1.8000,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12574442/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mathematics of Control Signals and Systems","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.1007/s00498-023-00348-3","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/4/21 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"AUTOMATION & CONTROL SYSTEMS","Score":null,"Total":0}
引用次数: 0
Abstract
Circadian rhythm, cell division and metabolic oscillations are rhythmic cellular behaviors that must be both robust but also to respond to changes in their environment. In this work, we study emergent behavior of coupled biochemical oscillators, modeled as repressilators. While more traditional approaches to oscillators synchronization often use phase oscillators, our approach uses switching systems that may be more appropriate for cellular networks dynamics governed by biochemical switches. We show that while one-directional coupling maintains stable oscillation of individual repressilators, there are well-characterized parameter regimes of mutually coupled repressilators, where oscillations stop. In other parameter regimes, joint oscillations continue. Our results may have implications for the understanding of condition-dependent coupling and un-coupling of regulatory networks.
期刊介绍:
Mathematics of Control, Signals, and Systems (MCSS) is an international journal devoted to mathematical control and system theory, including system theoretic aspects of signal processing.
Its unique feature is its focus on mathematical system theory; it concentrates on the mathematical theory of systems with inputs and/or outputs and dynamics that are typically described by deterministic or stochastic ordinary or partial differential equations, differential algebraic equations or difference equations.
Potential topics include, but are not limited to controllability, observability, and realization theory, stability theory of nonlinear systems, system identification, mathematical aspects of switched, hybrid, networked, and stochastic systems, and system theoretic aspects of optimal control and other controller design techniques. Application oriented papers are welcome if they contain a significant theoretical contribution.