Oscillator death in coupled biochemical oscillators.

IF 1.8 4区 计算机科学 Q3 AUTOMATION & CONTROL SYSTEMS Mathematics of Control Signals and Systems Pub Date : 2023-12-01 Epub Date: 2023-04-21 DOI:10.1007/s00498-023-00348-3
Tomáš Gedeon, Breschine Cummins
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Abstract

Circadian rhythm, cell division and metabolic oscillations are rhythmic cellular behaviors that must be both robust but also to respond to changes in their environment. In this work, we study emergent behavior of coupled biochemical oscillators, modeled as repressilators. While more traditional approaches to oscillators synchronization often use phase oscillators, our approach uses switching systems that may be more appropriate for cellular networks dynamics governed by biochemical switches. We show that while one-directional coupling maintains stable oscillation of individual repressilators, there are well-characterized parameter regimes of mutually coupled repressilators, where oscillations stop. In other parameter regimes, joint oscillations continue. Our results may have implications for the understanding of condition-dependent coupling and un-coupling of regulatory networks.

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耦合生化振荡器中的振荡器死亡。
昼夜节律、细胞分裂和代谢振荡都是有节奏的细胞行为,它们既要健壮,又要对环境的变化做出反应。在这项工作中,我们研究耦合生化振荡器的紧急行为,建模为再减压器。虽然更传统的振荡器同步方法通常使用相位振荡器,但我们的方法使用的开关系统可能更适合由生化开关控制的细胞网络动态。我们表明,单向耦合保持了单个稳压器的稳定振荡,而相互耦合的稳压器存在良好表征的参数区,振荡停止。在其他参数下,关节振荡继续。我们的研究结果可能对理解调节网络的条件依赖性耦合和非耦合具有启示意义。
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来源期刊
Mathematics of Control Signals and Systems
Mathematics of Control Signals and Systems 工程技术-工程:电子与电气
CiteScore
2.90
自引率
0.00%
发文量
18
审稿时长
>12 weeks
期刊介绍: Mathematics of Control, Signals, and Systems (MCSS) is an international journal devoted to mathematical control and system theory, including system theoretic aspects of signal processing. Its unique feature is its focus on mathematical system theory; it concentrates on the mathematical theory of systems with inputs and/or outputs and dynamics that are typically described by deterministic or stochastic ordinary or partial differential equations, differential algebraic equations or difference equations. Potential topics include, but are not limited to controllability, observability, and realization theory, stability theory of nonlinear systems, system identification, mathematical aspects of switched, hybrid, networked, and stochastic systems, and system theoretic aspects of optimal control and other controller design techniques. Application oriented papers are welcome if they contain a significant theoretical contribution.
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