Based GPU approach to accelerate spectroscopy Raman spectrum processing

Imane Zouaneb, M. Belarbi, A. Chouarfia
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Abstract

Raman spectrometry is a technique that allows detecting chemical products through a number of representative peaks found in an image spectrum or numeric series of data. The Raman spectrum machine generates a CSV file or an image as a curve which is the result of the diagnosis product. The analysis of the spectrum peaks permits to detect the chemical origin of the concerned product. Scientists do this operation manually, which makes it hard and long in terms of time. Graphics Processing Units (GPUs) allow us to make the processing faster and more efficient, thanks to its multicore architecture. The aim of the present paper is to propose a new GPU based approach to automate the molecule detection operation using image-processing techniques with OpenCL parallel implementation. We propose two parallel solutions, which will be compared to each other. We apply the exploited approach to analyze ionic liquids and biomaterials samples.
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基于GPU的加速光谱拉曼光谱处理方法
拉曼光谱法是一种技术,可以通过在图像光谱或数字系列数据中发现的一些代表性峰来检测化学产品。拉曼光谱机生成CSV文件或图像作为曲线,这是诊断产品的结果。对光谱峰的分析允许检测有关产品的化学来源。科学家们都是手工操作,这使得这项工作既困难又费时。图形处理单元(gpu)的多核架构使我们的处理速度更快,效率更高。本文的目的是提出一种新的基于GPU的方法,使用OpenCL并行实现的图像处理技术来自动化分子检测操作。我们提出两个并行的解决方案,并将它们相互比较。我们应用该方法分析离子液体和生物材料样品。
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