Sarah A. M. Luttrell, S. Drovetski, N. F. Dahlan, Damani Eubanks, C. Dove
{"title":"ND2 as an Additional Genetic Marker to Improve Identification of Diving Ducks Involved in Bird Strikes","authors":"Sarah A. M. Luttrell, S. Drovetski, N. F. Dahlan, Damani Eubanks, C. Dove","doi":"10.26077/4DC6-AD95","DOIUrl":null,"url":null,"abstract":"Knowing the exact species of birds involved in damaging collisions with aircraft (bird strikes) is paramount to managing and preventing these types of human–wildlife conflicts. While a standard genetic marker, or DNA barcode (mitochondrial DNA gene cytochrome-c oxidase 1, or CO1), can reliably identify most avian species, this marker cannot distinguish among some closely related species. Diving ducks within the genus Aythya are an example of congeneric waterfowl involved in bird strikes where several species pairs cannot be reliably identified with the standard DNA barcode. Here, we describe methods for using an additional genetic marker (mitochondrial DNA gene NADH dehydrogenase subunit 2, or ND2) for identification of 9 Aythya spp. Gene-specific phylogenetic trees and genetic distances among taxa reveal that ND2 is more effective than CO1 at genetic identification of diving ducks studied here. Compared with CO1, the ND2 gene tree is more statistically robust, has a minimum of 1.5 times greater genetic distance between sister clades, and resolves paraphyly in 2 clades. While CO1 is effective for identification of most bird strike cases, this study underscores the value of targeted incorporation of additional genetic markers for species identification of taxa that are known to be problematic using standard DNA barcoding.","PeriodicalId":13095,"journal":{"name":"Human–Wildlife Interactions","volume":"161 1","pages":"7"},"PeriodicalIF":0.9000,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Human–Wildlife Interactions","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.26077/4DC6-AD95","RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIODIVERSITY CONSERVATION","Score":null,"Total":0}
引用次数: 0
Abstract
Knowing the exact species of birds involved in damaging collisions with aircraft (bird strikes) is paramount to managing and preventing these types of human–wildlife conflicts. While a standard genetic marker, or DNA barcode (mitochondrial DNA gene cytochrome-c oxidase 1, or CO1), can reliably identify most avian species, this marker cannot distinguish among some closely related species. Diving ducks within the genus Aythya are an example of congeneric waterfowl involved in bird strikes where several species pairs cannot be reliably identified with the standard DNA barcode. Here, we describe methods for using an additional genetic marker (mitochondrial DNA gene NADH dehydrogenase subunit 2, or ND2) for identification of 9 Aythya spp. Gene-specific phylogenetic trees and genetic distances among taxa reveal that ND2 is more effective than CO1 at genetic identification of diving ducks studied here. Compared with CO1, the ND2 gene tree is more statistically robust, has a minimum of 1.5 times greater genetic distance between sister clades, and resolves paraphyly in 2 clades. While CO1 is effective for identification of most bird strike cases, this study underscores the value of targeted incorporation of additional genetic markers for species identification of taxa that are known to be problematic using standard DNA barcoding.
期刊介绍:
Human–Wildlife Interactions (HWI) serves the professional needs of the wildlife biologist and manager in the arena of human–wildlife conflicts/interactions, wildlife damage management, and contemporary wildlife management. The intent of HWI is to publish original contributions on all aspects of contemporary wildlife management and human–wildlife interactions with an emphasis on scientific research and management case studies that identify and report innovative conservation strategies, technologies, tools, and partnerships that can enhance human–wildlife interactions by mitigating human–wildlife conflicts through direct and indirect management of wildlife and increased stakeholder engagement. Our intent is to promote a dialogue among wildlife professionals concerning contemporary management issues. As such, we hope to provide a repository for wildlife management science and case studies that document and share manager experiences and lessons learned.