{"title":"Measuring COVID-19 spreading speed through the mean time between infections indicator","authors":"G. Pena, Ver'onica Moreno, N. R. Barraza","doi":"10.1515/em-2022-0106","DOIUrl":null,"url":null,"abstract":"Abstract Objectives To introduce a novel way of measuring the spreading speed of an epidemic. Methods We propose to use the mean time between infections (MTBI) metric obtained from a recently introduced nonhomogeneous Markov stochastic model. Different types of parameter calibration are performed. We estimate the MTBI using data from different time windows and from the whole stage history and compare the results. In order to detect waves and stages in the input data, a preprocessing filtering technique is applied. Results The results of applying this indicator to the COVID-19 reported data of infections from Argentina, Germany and the United States are shown. We find that the MTBI behaves similarly with respect to the different data inputs, whereas the model parameters completely change their behaviour. Evolution over time of the parameters and the MTBI indicator is also shown. Conclusions We show evidence to support the claim that the MTBI is a rather good indicator in order to measure the spreading speed of an epidemic, having similar values whatever the input data size.","PeriodicalId":37999,"journal":{"name":"Epidemiologic Methods","volume":"24 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Epidemiologic Methods","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1515/em-2022-0106","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Mathematics","Score":null,"Total":0}
引用次数: 0
Abstract
Abstract Objectives To introduce a novel way of measuring the spreading speed of an epidemic. Methods We propose to use the mean time between infections (MTBI) metric obtained from a recently introduced nonhomogeneous Markov stochastic model. Different types of parameter calibration are performed. We estimate the MTBI using data from different time windows and from the whole stage history and compare the results. In order to detect waves and stages in the input data, a preprocessing filtering technique is applied. Results The results of applying this indicator to the COVID-19 reported data of infections from Argentina, Germany and the United States are shown. We find that the MTBI behaves similarly with respect to the different data inputs, whereas the model parameters completely change their behaviour. Evolution over time of the parameters and the MTBI indicator is also shown. Conclusions We show evidence to support the claim that the MTBI is a rather good indicator in order to measure the spreading speed of an epidemic, having similar values whatever the input data size.
期刊介绍:
Epidemiologic Methods (EM) seeks contributions comparable to those of the leading epidemiologic journals, but also invites papers that may be more technical or of greater length than what has traditionally been allowed by journals in epidemiology. Applications and examples with real data to illustrate methodology are strongly encouraged but not required. Topics. genetic epidemiology, infectious disease, pharmaco-epidemiology, ecologic studies, environmental exposures, screening, surveillance, social networks, comparative effectiveness, statistical modeling, causal inference, measurement error, study design, meta-analysis