Synthesis, DFT Calculations to investigate the Structure Electronic, Absorption Electronic Spectra, Antimicrobial Activity Application, and Non-Linear Optical Analysis of Pyridinyl and Pyrimidinyl Phosphonates Schemes

Abstract

In this paper, the structure optimized and calculations electronic properties for the studied of two compounds which are 2 is Diethyl {5-[(2-hydroxy-5-methyl phenyl) carbonyl]-2-thioxo-1,2,3,4-tetrahydropyrimidin-4-yl} - phosphonate (2), compound 4 is Diethyl {6-amino-1-(4-chlorophenyl)-5-cyano-3-[(2-hydroxy-5-methyl phenyl)carbonyl]-1,2-dihydropyridin-2-yl]}phosphonate (4) have been performed by using to DFT the method at the B3LYP/6-311++G (d, p) theory level. UV-Vis spectra, in both methanol and dioxane solvents, have been employed for two compounds 2 and 4 by density functional time-dependent theory (TD-DFT) calculations at the same level of calculation. The method of Coulomb-attenuating (CAM-B3LYP) and Corrected Linear Response Polarizable Continuum Model (CLR) PCM studied for theoretically obtaining the absorption electronic spectra in the gas phase, methanol, and dioxane, respectively; indicate a good agreement with the observed spectra and FT-IR, vibrational spectra were calculated. The GIAO method calculated the 1H and 13C NMR chemical shifts theoretically values which reflect better coincidence with the experimental chemical shifts. The dihedral angles result of calculations show that two compounds 2 and 4 are non-planar. The stability of the two compounds 2 and 4, the hyper conjugative interactions, the delocalization of the atomic charges were analyzed with the Natural Orbital Bond analysis (NBO). The relocation of electronic density and the electronic structures were discussed. Studied functional density local descriptors, (MEP) Molecular Electrostatic Potential, molecular border orbitals, and absorption spectral. Analysis of the global descriptors revealed that compound 4 is the most reactive with an energy difference between the border orbital of ΔEgap = 3.605 eV. Furthermore, this compound 4 is the less stable, the softest, and has the greatest electronic exchange capacity of the other compound 2 studied. Studied by DFT calculations (SAR) structure-activity relationship and contacted with practical antimicrobial results for compounds 2 and 4.