The Reaction Path of Product Release in NO Detoxification at the Active Site of Truncated Hemoglobin N in MCSCF Approach

K. Simon, A. V. Tulub
{"title":"The Reaction Path of Product Release in NO Detoxification at the Active Site of Truncated Hemoglobin N in MCSCF Approach","authors":"K. Simon, A. V. Tulub","doi":"10.17537/2020.15.172","DOIUrl":null,"url":null,"abstract":"\n The Multi-Configurational Self-Consistent Field approach with the geometry optimization was applied to the calculation of electronic properties of active site of heme core of truncated hemoglobin N, with the inclusion of [ONOO] functional group and two water molecules. The localized molecular orbitals are employed as a starting set. Two subspaces of full interaction have been used by the construction of MCSCF wavefunction. The first one includes 3d orbitals of iron atom, and the second contains bonding and antibonding molecular orbitals of peroxynitrite with one unshared electronic pair of the O2 fragment. The reaction is characterized by two transition states; the products are nitrate anion and one unbound water molecule. There arise an evidence of NO2 and NO radicals as the reaction products.\n","PeriodicalId":53525,"journal":{"name":"Mathematical Biology and Bioinformatics","volume":"42 1","pages":"172-179"},"PeriodicalIF":0.0000,"publicationDate":"2020-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mathematical Biology and Bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.17537/2020.15.172","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Mathematics","Score":null,"Total":0}
引用次数: 1

Abstract

The Multi-Configurational Self-Consistent Field approach with the geometry optimization was applied to the calculation of electronic properties of active site of heme core of truncated hemoglobin N, with the inclusion of [ONOO] functional group and two water molecules. The localized molecular orbitals are employed as a starting set. Two subspaces of full interaction have been used by the construction of MCSCF wavefunction. The first one includes 3d orbitals of iron atom, and the second contains bonding and antibonding molecular orbitals of peroxynitrite with one unshared electronic pair of the O2 fragment. The reaction is characterized by two transition states; the products are nitrate anion and one unbound water molecule. There arise an evidence of NO2 and NO radicals as the reaction products.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
MCSCF方法中截断血红蛋白N活性位点NO解毒产物释放的反应途径
采用几何优化的多构型自洽场方法计算了含有[ONOO]官能团和两个水分子的截断血红蛋白N血红素核活性位点的电子性质。用定域分子轨道作为起始集。用两个完全相互作用的子空间构造了MCSCF波函数。第一个包含铁原子的三维轨道,第二个包含过氧亚硝酸盐的成键和反键分子轨道,O2片段有一个未共享电子对。该反应具有两个过渡态;产物是硝酸盐阴离子和一个未结合的水分子。有证据表明,NO2和NO自由基是反应产物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Mathematical Biology and Bioinformatics
Mathematical Biology and Bioinformatics Mathematics-Applied Mathematics
CiteScore
1.10
自引率
0.00%
发文量
13
期刊最新文献
Modeling Growth and Photoadaptation of Porphyridium purpureum Batch Culture Mathematical Modeling of the Initial Period of Spread of HIV-1 Infection in the Lymphatic Node Mathematical Model of Closed Microecosystem “Algae – Heterotrophic Bacteria” Using a Drug Repurposing Strategy to Virtually Screen Potential HIV-1 Entry Inhibitors That Block the NHR Domain of the Viral Envelope Protein gp41 Applying Laplace Transformation on Epidemiological Models as Caputo Derivatives
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1