Genetic identification of prey species from teeth in faeces from the Endangered leopard cat Prionailurus bengalensis using mitochondrial cytochrome b gene sequence

IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Mitochondrial Dna Part a Pub Date : 2018-02-17 DOI:10.1080/24701394.2016.1261852
Tae-wook Kim, H. Lee, Yoo-Kyung Kim, Hong-Shik Oh, Sang-Hyun Han
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引用次数: 4

Abstract

Abstract To understand the dietary ecology of the leopard cat (Prionailurus bengalensis), DNA analysis was performed to identify prey species using DNA isolated from teeth harvested from the faeces of this feline species. From 70 DNA samples, a total of 52 mitochondrial DNA (mtDNA) cytochrome b (cytb) gene sequences of mammals were identified. The results of a sequence identity test indicated that those sequences were derived from four rodent species (Apodemus agrarius, Apodemus peninsulae, Eothenomys regulus and Tamias sibiricus) and two shrew species (Crocidura lasiura and Crocidura shantungensis). The sequences contained nine unique cytb sequences from site 1 and 13 from site 2. These results indicate that the leopard cat hunts rodents and shrews, and at least nine animals at site 1 and 13 animals at site 2 were eaten. These findings suggest that the animal molecular signatures that remain undigested in the faeces may provide useful ecological information about food items and may contribute to a better understanding of the leopard cat’s feeding ecology.
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利用线粒体细胞色素b基因序列对濒危豹猫(Prionailurus bengalensis)粪便牙齿猎物进行遗传鉴定
摘要为了解豹猫(Prionailurus bengalensis)的饮食生态,利用从该猫科动物粪便中提取的牙齿中分离的DNA进行DNA分析,以确定其猎物种类。从70份DNA样本中,共鉴定出52条哺乳动物线粒体DNA (mtDNA)细胞色素b (cytb)基因序列。序列鉴定结果表明,这些序列来源于4种啮齿类动物(黑线姬鼠、半岛姬鼠、长尾姬鼠和西伯利亚田鼠)和2种鼩鼱(长尾姬鼠和山东姬鼠)。该序列包含来自位点1的9个独特的cytb序列和来自位点2的13个独特的cytb序列。这些结果表明,豹猫捕食啮齿动物和鼩鼱,在1号点至少吃了9只动物,在2号点至少吃了13只动物。这些发现表明,粪便中未被消化的动物分子特征可能提供有关食物的有用生态信息,并有助于更好地了解豹猫的摄食生态。
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来源期刊
Mitochondrial Dna Part a
Mitochondrial Dna Part a Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.00
自引率
0.00%
发文量
6
期刊介绍: Mitochondrial DNA Part A publishes original high-quality manuscripts on physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism, and/or interactions. Manuscripts on cytosolic and extracellular mtDNA, and on dysfunction caused by alterations in mtDNA integrity as well as methodological papers detailing novel approaches for mtDNA manipulation in vitro and in vivo are welcome. Descriptive papers on DNA sequences from mitochondrial genomes, and also analytical papers in the areas of population genetics, phylogenetics and human evolution that use mitochondrial DNA as a source of evidence for studies will be considered for publication. The Journal also considers manuscripts that examine population genetic and systematic theory that specifically address the use of mitochondrial DNA sequences, as well as papers that discuss the utility of mitochondrial DNA information in medical studies and in human evolutionary biology.
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