Nuclear magnetic resonance (NMR) applied to membrane–protein complexes

IF 7.2 2区 生物学 Q1 BIOPHYSICS Quarterly Reviews of Biophysics Pub Date : 2016-08-08 DOI:10.1017/S003358351600010X
M. Kaplan, C. Pinto, Klaartje Houben, M. Baldus
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引用次数: 34

Abstract

Abstract Increasing evidence suggests that most proteins occur and function in complexes rather than as isolated entities when embedded in cellular membranes. Nuclear magnetic resonance (NMR) provides increasing possibilities to study structure, dynamics and assembly of such systems. In our review, we discuss recent methodological progress to study membrane–protein complexes (MPCs) by NMR, starting with expression, isotope-labeling and reconstitution protocols. We review approaches to deal with spectral complexity and limited spectral spectroscopic sensitivity that are usually encountered in NMR-based studies of MPCs. We highlight NMR applications in various classes of MPCs, including G-protein-coupled receptors, ion channels and retinal proteins and extend our discussion to protein–protein complexes that span entire cellular compartments or orchestrate processes such as protein transport across or within membranes. These examples demonstrate the growing potential of NMR-based studies of MPCs to provide critical insight into the energetics of protein–ligand and protein–protein interactions that underlie essential biological functions in cellular membranes.
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核磁共振(NMR)应用于膜-蛋白复合物
越来越多的证据表明,当嵌入细胞膜时,大多数蛋白质以复合物的形式发生和起作用,而不是作为孤立的实体。核磁共振(NMR)为研究此类系统的结构、动力学和组装提供了越来越多的可能性。在我们的回顾中,我们讨论了最近的方法进展研究膜蛋白复合物(MPCs)的核磁共振,从表达,同位素标记和重构方案开始。我们回顾了处理光谱复杂性和有限的光谱灵敏度的方法,这些方法通常在基于核磁共振的MPCs研究中遇到。我们强调核磁共振在各种MPCs中的应用,包括g蛋白偶联受体、离子通道和视网膜蛋白,并将我们的讨论扩展到跨越整个细胞室或协调过程(如跨膜或膜内的蛋白质运输)的蛋白质-蛋白质复合物。这些例子表明,基于核磁共振的MPCs研究具有越来越大的潜力,可以为细胞膜中基本生物功能基础上的蛋白质-配体和蛋白质-蛋白质相互作用的能量学提供关键的见解。
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来源期刊
Quarterly Reviews of Biophysics
Quarterly Reviews of Biophysics 生物-生物物理
CiteScore
12.90
自引率
1.60%
发文量
16
期刊介绍: Quarterly Reviews of Biophysics covers the field of experimental and computational biophysics. Experimental biophysics span across different physics-based measurements such as optical microscopy, super-resolution imaging, electron microscopy, X-ray and neutron diffraction, spectroscopy, calorimetry, thermodynamics and their integrated uses. Computational biophysics includes theory, simulations, bioinformatics and system analysis. These biophysical methodologies are used to discover the structure, function and physiology of biological systems in varying complexities from cells, organelles, membranes, protein-nucleic acid complexes, molecular machines to molecules. The majority of reviews published are invited from authors who have made significant contributions to the field, who give critical, readable and sometimes controversial accounts of recent progress and problems in their specialty. The journal has long-standing, worldwide reputation, demonstrated by its high ranking in the ISI Science Citation Index, as a forum for general and specialized communication between biophysicists working in different areas. Thematic issues are occasionally published.
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