Identification of Novel Biomarkers Using Serum and Urinary Proteomics for Early Detection of Hypoxic Ischemic Encephalopathy.

IF 4.7 2区 工程技术 Q1 MECHANICS Engineering Fracture Mechanics Pub Date : 2024-10-01 Epub Date: 2023-07-25 DOI:10.1007/s12291-023-01143-2
Sumrati Gurtoo, Chinmaya Narayana Kotimoole, K S Sahana, A B Arun
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Abstract

Hypoxic-ischemic encephalopathy (HIE) is a severe birth complication affecting neonates. Around 40-60% of affected neonates die by two years of age or have severe disabilities and neurodevelopmental delays. The early assessments of brain injury using traditional clinical and biochemical indicators do not always align with its severity and recovery. This delays identifying neonates who may benefit from adjuvant therapeutic strategies and monitoring therapy response. Our aim was to identify specific proteins using proteomic approach to predict the severity of neonatal asphyxia so that its outcome can also be prevented. To achieve this goal a case-control study was conducted on 38 neonates, and serum and urine samples were collected within 24 h of life. Clinical findings, biochemical parameters, and outcomes of the neonates were recorded. A tandem mass spectrometry-based quantitative proteomics approach was used to identify proteins in the serum and urine of HIE neonates. Bioinformatics analyses were performed to assess the potential features and competence of the identified differentially expressed proteins. This resulted in identification of 51 differentially expressed proteins which were found common to both serum and urine proteomic data. Some of the promising biomarkers found were APOD, ORM1, SOD1, and FABP1. These proteins were associated with the pathways like Amyloid fiber formation, diseases of programmed cell death, detoxification of reactive oxygen species, and neurodegenerative diseases. This study will pave the way for identifying the biomarkers (proteins) that can screen neonates for brain injury and monitor the disease progression, which may reduce mortality and neurodevelopmental impairment.

Supplementary information: The online version contains supplementary material available at 10.1007/s12291-023-01143-2.

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利用血清和尿液蛋白质组学鉴定新型生物标记物以早期检测缺氧缺血性脑病
缺氧缺血性脑病(HIE)是一种影响新生儿的严重出生并发症。约有 40-60% 的受影响新生儿在两岁前死亡或出现严重残疾和神经发育迟缓。使用传统的临床和生化指标对脑损伤进行早期评估并不总是与脑损伤的严重程度和恢复情况相一致。这就延误了识别可能受益于辅助治疗策略的新生儿和监测治疗反应的时间。我们的目的是利用蛋白质组学方法鉴定特定蛋白质,以预测新生儿窒息的严重程度,从而预防其后果。为了实现这一目标,我们对 38 名新生儿进行了病例对照研究,收集了他们出生后 24 小时内的血清和尿液样本。研究记录了新生儿的临床表现、生化指标和结局。研究采用串联质谱定量蛋白质组学方法鉴定 HIE 新生儿血清和尿液中的蛋白质。生物信息学分析评估了已识别的差异表达蛋白的潜在特征和能力。结果发现血清和尿液蛋白质组数据中共有 51 种差异表达蛋白质。发现的一些有前景的生物标记物包括 APOD、ORM1、SOD1 和 FABP1。这些蛋白质与淀粉样纤维的形成、细胞程序性死亡疾病、活性氧解毒和神经退行性疾病等途径有关。这项研究将为确定可筛查新生儿脑损伤和监测疾病进展的生物标志物(蛋白质)铺平道路,从而降低死亡率和神经发育障碍:在线版本包含补充材料,可在 10.1007/s12291-023-01143-2上获取。
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来源期刊
CiteScore
8.70
自引率
13.00%
发文量
606
审稿时长
74 days
期刊介绍: EFM covers a broad range of topics in fracture mechanics to be of interest and use to both researchers and practitioners. Contributions are welcome which address the fracture behavior of conventional engineering material systems as well as newly emerging material systems. Contributions on developments in the areas of mechanics and materials science strongly related to fracture mechanics are also welcome. Papers on fatigue are welcome if they treat the fatigue process using the methods of fracture mechanics.
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