Quantum Computational, Spectroscopic, NHO and Molecular Docking Studies on 1-Methyl-nicotinamide (MNA): An Antithrombotic, Anti-inflammatory, Gastroprotective and Vasoprotective Compound

Mukesh Kumar, Satyavir Singh, N. Siddiqui, S. Javed
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Abstract

In present work, 1-methylnicotinamide (1-MNA) has been investigated theoretically by density functional theory approach and investigated its vibrational spectroscopy. To complete the structure optimization, determination of vibrational frequencies and other valuable parameters, B3LYP method used with the 6-311++G(d,p) basis set. Atoms in molecules theory (AIM) had been used to evaluate ellipticity, isosurface projection by electron localization function and binding energies. The IR and Raman spectra have also been calculated computationally. NBO analysis employed to determine interactions of donor and acceptor. Fukui functions and molecular electrostatic potential (MEP) showed reactive regions of the molecule. UV-vis spectrum calculated using TD-DFT/PCM methods with different solvents. Thermodynamic properties like free energy, enthalpy and entropy with various temperature were calculated. By the use of the electrophilicity index, the probability of the bioactive nature of the molecule was proved theoretically. Protein-ligand interactions calculated and established by molecular docking. The biological investigations for druglikeness also employed for the (1-MNA).
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抗血栓、抗炎、胃保护和血管保护化合物1-甲基烟酰胺(MNA)的量子计算、光谱、NHO和分子对接研究
本文采用密度泛函理论方法对1-甲基烟酰胺(1-MNA)进行了理论研究,并对其振动谱进行了研究。为完成结构优化,确定振动频率等有价值的参数,采用B3LYP方法与6-311++G(d,p)基集。用分子原子理论(AIM)来计算椭圆度、电子局域函数等面投影和结合能。对红外光谱和拉曼光谱也进行了计算。NBO分析用于确定供体和受体的相互作用。福井函数和分子静电势(MEP)显示了分子的反应区。用不同溶剂的TD-DFT/PCM方法计算紫外-可见光谱。计算了不同温度下的自由能、焓和熵等热力学性质。利用亲电性指数,从理论上证明了分子具有生物活性的可能性。通过分子对接计算和建立蛋白质与配体的相互作用。对(1-MNA)进行药物相似性的生物学研究。
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