Proton Reaction Path in Base Pairs of DNA Molecule According to the Complete Active Space Self-Consistent Field Method

K. Simon, A. V. Tulub
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Abstract

The double proton transfer reaction paths in AT and CG base pairs of DNA molecule are calculated in the Complete Active Space Self-Consistent Field method and compared with the same paths in Density Functional Theory with B3LYP approximation approach. We found that an essential increase of an activation energy, which significantly reduces the probability of spontaneous mutations in DNA via double proton transfer. There exist two transition points on the singlet potential energy surface divided by a flat region for GC base pair. The applicability of various quantum-chemical methods for description of double proton transfer reactions was discussed.
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基于完全活动空间自洽场方法的DNA分子碱基对质子反应路径
采用完全活动空间自洽场方法计算了DNA分子AT和CG碱基对的双质子转移反应路径,并采用B3LYP近似方法与密度泛函数理论中的相同路径进行了比较。我们发现活化能的基本增加,这大大降低了DNA通过双质子转移自发突变的可能性。GC碱基对的单线态势能面上有两个过渡点,两个过渡点由一个平坦区域划分。讨论了描述双质子转移反应的各种量子化学方法的适用性。
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来源期刊
Mathematical Biology and Bioinformatics
Mathematical Biology and Bioinformatics Mathematics-Applied Mathematics
CiteScore
1.10
自引率
0.00%
发文量
13
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