Cloud-Based Real-Time Molecular Screening Platform with MolFormer

Brian M. Belgodere, V. Chenthamarakshan, Payel Das, Pierre L. Dognin, Toby Kurien, Igor Melnyk, Youssef Mroueh, Inkit Padhi, Mattia Rigotti, Jarret Ross, Yair Schiff, R. Young
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引用次数: 1

Abstract

With the prospect of automating a number of chemical tasks with high fidelity, chemical language processing models are emerging at a rapid speed. Here, we present a cloud-based real-time platform that allows users to virtually screen molecules of interest. For this purpose, molecular embeddings inferred from a recently proposed large chemical language model, named MolFormer, are leveraged. The platform currently supports three tasks: nearest neighbor retrieval, chemical space visualization, and property prediction. Based on the functionalities of this platform and results obtained, we believe that such a platform can play a pivotal role in automating chemistry and chemical engineering research, as well as assist in drug discovery and material design tasks. A demo of our platform is provided at \url{www.ibm.biz/molecular_demo}.
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基于云的MolFormer实时分子筛选平台
随着许多化学任务的高保真自动化的前景,化学语言处理模型正在迅速出现。在这里,我们提出了一个基于云的实时平台,允许用户虚拟筛选感兴趣的分子。为此,我们利用了从最近提出的大型化学语言模型MolFormer中推断出的分子嵌入。该平台目前支持三个任务:最近邻检索、化学空间可视化和属性预测。基于该平台的功能和所获得的结果,我们认为该平台可以在自动化化学和化学工程研究中发挥关键作用,并协助药物发现和材料设计任务。我们的平台的演示在\url{www.ibm.biz/molecular_demo}上提供。
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