The steady state and response to a periodic stimulation of the firing rate for a theta neuron with correlated noise.

IF 1.5 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Journal of Computational Neuroscience Pub Date : 2023-02-01 Epub Date: 2022-10-22 DOI:10.1007/s10827-022-00836-6
Jannik Franzen, Lukas Ramlow, Benjamin Lindner
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Abstract

The stochastic activity of neurons is caused by various sources of correlated fluctuations and can be described in terms of simplified, yet biophysically grounded, integrate-and-fire models. One paradigmatic model is the quadratic integrate-and-fire model and its equivalent phase description by the theta neuron. Here we study the theta neuron model driven by a correlated Ornstein-Uhlenbeck noise and by periodic stimuli. We apply the matrix-continued-fraction method to the associated Fokker-Planck equation to develop an efficient numerical scheme to determine the stationary firing rate as well as the stimulus-induced modulation of the instantaneous firing rate. For the stationary case, we identify the conditions under which the firing rate decreases or increases by the effect of the colored noise and compare our results to existing analytical approximations for limit cases. For an additional periodic signal we demonstrate how the linear and nonlinear response terms can be computed and report resonant behavior for some of them. We extend the method to the case of two periodic signals, generally with incommensurable frequencies, and present a particular case for which a strong mixed response to both signals is observed, i.e. where the response to the sum of signals differs significantly from the sum of responses to the single signals. We provide Python code for our computational method: https://github.com/jannikfranzen/theta_neuron .

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具有相关噪声的θ神经元的稳态和对周期性刺激发射率的反应。
神经元的随机活动是由各种来源的相关波动引起的,可以用简化但具有生物物理学基础的积分-发射模型来描述。一个典型的模型是二次积分-发射模型及其等效的θ神经元相位描述。在这里,我们研究了由相关奥恩斯坦-乌伦贝克噪声和周期性刺激驱动的θ神经元模型。我们将矩阵连续分数法应用于相关的福克-普朗克方程,开发出一种高效的数值方案,用于确定静态发射率以及刺激对瞬时发射率的调制。对于静态情况,我们确定了发射率在彩色噪声影响下降低或升高的条件,并将我们的结果与现有的极限情况分析近似值进行了比较。对于额外的周期信号,我们演示了如何计算线性和非线性响应项,并报告了其中一些响应项的共振行为。我们将该方法扩展到通常频率不可比的两个周期性信号的情况,并介绍了一种特殊情况,即观察到对两个信号的强烈混合响应,即对信号总和的响应与对单个信号响应的总和有显著差异。我们提供了计算方法的 Python 代码:https://github.com/jannikfranzen/theta_neuron 。
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来源期刊
CiteScore
2.00
自引率
8.30%
发文量
32
审稿时长
3 months
期刊介绍: The Journal of Computational Neuroscience provides a forum for papers that fit the interface between computational and experimental work in the neurosciences. The Journal of Computational Neuroscience publishes full length original papers, rapid communications and review articles describing theoretical and experimental work relevant to computations in the brain and nervous system. Papers that combine theoretical and experimental work are especially encouraged. Primarily theoretical papers should deal with issues of obvious relevance to biological nervous systems. Experimental papers should have implications for the computational function of the nervous system, and may report results using any of a variety of approaches including anatomy, electrophysiology, biophysics, imaging, and molecular biology. Papers investigating the physiological mechanisms underlying pathologies of the nervous system, or papers that report novel technologies of interest to researchers in computational neuroscience, including advances in neural data analysis methods yielding insights into the function of the nervous system, are also welcomed (in this case, methodological papers should include an application of the new method, exemplifying the insights that it yields).It is anticipated that all levels of analysis from cognitive to cellular will be represented in the Journal of Computational Neuroscience.
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