Investigating non-fungal eukaryotic diversity in snow in the Antarctic Peninsula region using DNA metabarcoding.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2023-11-14 DOI:10.1007/s00792-023-01322-2
Paulo E A S Câmara, Graciéle C A de Menezes, Fabyano A C Lopes, Thiago da Silva Paiva, Micheline Carvalho-Silva, Peter Convey, Eduardo T Amorim, Luiz H Rosa
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Abstract

Snow is a unique microhabitat, despite being a harsh environment, multiple life forms have adapted to survive in it. While algae, bacteria and fungi are dominant microorganisms in Antarctic snow, little is known about other organisms that may be present in this habitat. We used metabarcoding to investigate DNA sequence diversity of non-fungal eukaryotes present in snow obtained from six different sites across the Maritime Antarctica. A total of 20 taxa were assigned to obtained sequences, representing five Kingdoms (Chromista, Protozoa, Viridiplantae and Metazoa) and four phyla (Ciliophora, Cercozoa, Chlorophyta and Cnidaria). The highest diversity indices were detected in Trinity Peninsula followed by Robert Island, Arctowski Peninsula, Deception Island, King George Island and Snow Island. The most abundant assignments were to Trebouxiophyceae, followed by Chlamydomonas nivalis and Chlamidomonadales. No taxa were detected at all sites. Three potentially new records for Antarctica were detected: two Ciliophora (Aspidisca magna and Stokesia sp.) and the green algae Trebouxia potteri. Our data suggested that similarities found between the sites may be more related with snow physicochemical properties rather than geographic proximity or latitude. This study provides new insights into the diversity and distribution of eukaryotic organisms in Antarctic snow.

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利用DNA元条形码研究南极半岛地区积雪中非真菌真核生物的多样性。
雪是一个独特的微栖息地,尽管环境恶劣,但多种生命形式已经适应了在雪中生存。虽然藻类、细菌和真菌是南极雪中的主要微生物,但对可能存在于该栖息地的其他生物知之甚少。我们使用元条形码研究了来自南极海洋六个不同地点的雪中存在的非真菌真核生物的DNA序列多样性。该序列共划分了20个分类群,分别代表5个界(毛藻门、原生动物门、绿藻门和后生动物门)和4个门(纤毛虫门、尾藻门、绿藻门和刺胞门)。多样性指数最高的是Trinity半岛,其次是Robert岛、Arctowski半岛、Deception岛、King George岛和Snow岛。分布最多的是蝶藻科,其次是nivalis衣藻和Chlamydomonas Chlamidomonadales。所有样点均未检出分类群。在南极洲发现了三种可能的新记录:两种纤毛虫(大蜘蛛和Stokesia sp.)和绿藻Trebouxia potteri。我们的数据表明,这些地点之间的相似性可能更多地与雪的物理化学性质有关,而不是地理邻近或纬度。该研究为南极积雪真核生物的多样性和分布提供了新的认识。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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