Isolation and characterisation of promoters from mouse genome to drive post-meiotic germ cell-specific robust gene expression for functional genomics studies

IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochimica et Biophysica Acta-Gene Regulatory Mechanisms Pub Date : 2023-11-11 DOI:10.1016/j.bbagrm.2023.194994
Abhishek Das , Srimoyee Koner , Subeer S. Majumdar , Nirmalya Ganguli
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Abstract

The generation of spermatozoa from developing germ cells through mitotic and meiotic divisions is a highly regulated and complex process. Any defect in this process, may lead to subfertility/infertility. The role of different transcripts (mRNA/miRNA/lncRNA) in regulation of the pre-meiotic, meiotic, and post-meiotic stages of spermatogenesis are being proposed based on various multiomics based approaches. Such differential gene-expression is regulated by promoter elements that are activated in a stage specific manner. To determine the role of these differentially expressed transcripts in the process of meiosis, a robust post-meiotic germ cell specific promoter is required. In the present study, we have isolated and characterized the expression of the mouse Proacrosin, SP10, and ELP promoters for driving post-meiotic germ cell specific gene-expression. Promoter regions of all these 3 genes were isolated and cloned to generate mammalian expression vector. The transgene expression in post-meiotic germ cells was assessed in mice using the testicular electroporation method in vitro as well as in vivo, using above promoters. It was also validated in goat seminiferous tubules, in vitro. We have also carried out a comparative analysis of the strength of these promoters to confirm their robustness that indicated Proacrosin to be the most robust promoter that can be useful for diving post-meiotic germ cells specific gene-expression. These promoters can be used to alter gene-expression specifically in post-meiotic germ cells for deciphering the role(s) of germ cell genes in spermatogenic progression or for expressing various genome editing tools for engineering the germ cell genome to understand basis of subfertility/infertility.

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从小鼠基因组中分离和鉴定启动子,以驱动减数分裂后生殖细胞特异性健壮基因表达,用于功能基因组学研究。
发育中的生殖细胞通过有丝分裂和减数分裂产生精子是一个高度调控和复杂的过程。这一过程中的任何缺陷都可能导致生育能力低下/不孕。不同的转录物(mRNA/miRNA/lncRNA)在精子发生的减数分裂前、减数分裂前和减数分裂后阶段的调控作用正在基于各种基于多组学的方法被提出。这种差异基因表达是由启动子元件以特定阶段的方式激活来调节的。为了确定这些差异表达转录本在减数分裂过程中的作用,需要一个强大的减数分裂后生殖细胞特异性启动子。在本研究中,我们分离并表征了小鼠Proacrosin, SP10和ELP启动子的表达,以驱动减数分裂后生殖细胞特异性基因的表达。分离并克隆了这3个基因的启动子区,构建了哺乳动物表达载体。利用上述启动子,采用体外和体内睾丸电穿孔法对小鼠减数分裂后生殖细胞中的转基因表达进行了评估。它也在体外的山羊精管中得到了验证。我们还对这些启动子的强度进行了比较分析,以确认它们的稳健性,表明Proacrosin是最稳健性的启动子,可用于潜水减数分裂后生殖细胞特异性基因表达。这些启动子可用于改变减数分裂后生殖细胞中的基因表达,以破译生殖细胞基因在生精过程中的作用,或用于表达用于工程生殖细胞基因组的各种基因组编辑工具,以了解低生育能力/不孕症的基础。
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来源期刊
CiteScore
9.20
自引率
2.10%
发文量
63
审稿时长
44 days
期刊介绍: BBA Gene Regulatory Mechanisms includes reports that describe novel insights into mechanisms of transcriptional, post-transcriptional and translational gene regulation. Special emphasis is placed on papers that identify epigenetic mechanisms of gene regulation, including chromatin, modification, and remodeling. This section also encompasses mechanistic studies of regulatory proteins and protein complexes; regulatory or mechanistic aspects of RNA processing; regulation of expression by small RNAs; genomic analysis of gene expression patterns; and modeling of gene regulatory pathways. Papers describing gene promoters, enhancers, silencers or other regulatory DNA regions must incorporate significant functions studies.
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