Rearranging the Bird's Nest Fungi: molecular review of internal clades in Cyathus (Nidulariaceae, Basidiomycota).

IF 5.2 1区 生物学 Q1 MYCOLOGY Ima Fungus Pub Date : 2023-04-07 DOI:10.1186/s43008-023-00111-y
Rhudson Henrique Santos Ferreira da Cruz, Jefferson Dos Santos Góis, Paulo Marinho, Iuri Goulart Baseia, Kentaro Hosaka
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Abstract

The genus Cyathus was established in 1768, but more in-depth taxonomic studies with the group only occurred after 1844. In the following years, changes in the infrageneric classification of Cyathus were proposed based mainly on morphology. With advances in phylogenetic studies, the morphological classifications were tested and a new subdivision into three groups was proposed in 2007. Based on the last two classifications, this work aims to expand and understand the internal phylogenetic relationships among the fungi of the genus Cyathus and examine how these relationships are reflected in the taxonomic classification, through molecular analyses covering most of the species in the group, based on materials obtained from type specimens deposited in major fungal collections worldwide, besides expanding sampling with tropical species. Molecular analyses followed the protocols available in the literature, including the design of specific primers for Cyathus. In the phylogenetic analysis, using Maximum Parsimony and Bayesian methods, sequences of ITS and LSU regions from 41 samples of 39 species of Cyathus, 26 were placed with some nomenclatural types. The monophyly of Cyathus was confirmed with maximum support in both tests, and the infrageneric groups of the most recent classification were unchanged, but the clade striatum showed segregation into four groups and three subgroups. The phylogenetic organization is supported morphological characters, and diagnoses are presented for each group, as well as a dichotomous key for the infrageneric separation.

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鸟巢真菌的重新排列:Cyathus (Nidulariaceae,担子菌科)内部分支的分子综述。
Cyathus属于1768年被建立,但更深入的分类研究直到1844年才出现。在接下来的几年里,人们主要根据形态提出了Cyathus属下分类的变化。随着系统发育研究的进展,2007年对其形态分类进行了检验,并提出了新的三类群划分。在前两种分类的基础上,本工作旨在扩展和理解Cyathus属真菌之间的内部系统发育关系,并研究这些关系如何在分类分类中得到反映,通过分子分析,涵盖了该组中大多数物种,基于世界各地主要真菌收藏的模式标本的材料,并扩大了热带物种的采样。分子分析遵循文献中可用的协议,包括设计特异性引物的Cyathus。在系统发育分析中,利用最大简约法和贝叶斯方法对39种Cyathus的41份样品的ITS和LSU区序列进行了定位,其中26种具有一定的命名类型。两项试验均证实了Cyathus属的单系性,最新分类的下属类群没有变化,但分支纹状体分化为4个类群和3个亚类群。系统发育组织支持形态学特征,并为每一组提供诊断,以及一个二分法键,用于先天性分离。
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来源期刊
Ima Fungus
Ima Fungus Agricultural and Biological Sciences-Agricultural and Biological Sciences (miscellaneous)
CiteScore
11.00
自引率
3.70%
发文量
18
审稿时长
20 weeks
期刊介绍: The flagship journal of the International Mycological Association. IMA Fungus is an international, peer-reviewed, open-access, full colour, fast-track journal. Papers on any aspect of mycology are considered, and published on-line with final pagination after proofs have been corrected; they are then effectively published under the International Code of Nomenclature for algae, fungi, and plants. The journal strongly supports good practice policies, and requires voucher specimens or cultures to be deposited in a public collection with an online database, DNA sequences in GenBank, alignments in TreeBASE, and validating information on new scientific names, including typifications, to be lodged in MycoBank. News, meeting reports, personalia, research news, correspondence, book news, and information on forthcoming international meetings are included in each issue
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